Results 141 to 150 of about 144,700 (293)

Spliceosomal Introns: New Insights into their Evolution

open access: yes, 2003
A new genome-wide analysis of spliceosomal introns indicates massive loss and gain of introns has taken place in many eukaryotic lineages. Only a small subset of the analyzed introns was present in the common ancestor of plants, fungi, animals and ...
Zhaxybayeva, Olga, Gogarten, J.Peter
core   +1 more source

HapAsmbl: A reference‐aided pipeline for assembling haplotypes in Nanopore amplicon sequence data of polymorphic populations

open access: yesApplications in Plant Sciences, EarlyView.
Abstract Premise Advances in long‐read sequencing offer new possibilities to investigate haplotype diversity across multiple genes in plants and other taxa through multi‐locus, long‐read amplicon sequencing (multi‐locus LRAS). Despite this progress, there is a notable absence of dedicated bioinformatics pipelines for assembling diploid haplotypes of ...
Ayodele Oluwaseyi Fakoya   +4 more
wiley   +1 more source

Lengths of Orthologous Introns within a Quartet Are More Correlated than Those of Paralogous Introns

open access: yes, 2013
(A) Quartet orthologous intron pairs. x-axis, length (log10) of introns in human members of each quartet; y-axis, length (log10) of corresponding orthologous introns in the mouse member of the same quartet.
George Hartzell (61667)   +7 more
core   +1 more source

Leveraging target enrichment and genome skimming (Hyb‐Seq) of herbarium collections to unlock timber DNA barcoding

open access: yesApplications in Plant Sciences, EarlyView.
Abstract Premise DNA barcoding for timber species identification requires comprehensive reference datasets, informative DNA barcodes, and cost‐effective protocols. We developed a workflow leveraging Hyb‐Seq (target capture sequencing and genome skimming) to address these challenges, and we tested it on four genera from the mahogany family (Meliaceae ...
Sidonie Bellot   +14 more
wiley   +1 more source

Editorial: Genetically mobile elements repurposed by nature and biotechnologists

open access: yesFrontiers in Molecular Biosciences, 2022
Christopher W. Lennon   +4 more
doaj   +1 more source

Intron locations in genes from five grass genomes: (a) all introns, (b) recurrent loss introns and (c) PA introns.

open access: yes, 2014
The CDS lengths in genes are normalized to 1 and the positions of introns are calculated as (length from translation start)/(total size of CDS). The normalized gene is partitioned into 10 intervals (X-axis) and Y-axis values are the percentage of introns
Jeffrey L. Bennetzen (155032)   +2 more
core   +1 more source

The Role of miRNAs in Chicken Immune Regulation and Prospects for Disease‐Resistant Breeding

open access: yesAnimal Research and One Health, EarlyView.
A schematic workflow illustrating the screening of disease‐resistant miRNAs and the generation of miRNA‐based disease‐resistant chickens via PGC‐mediated germline genome editing. ABSTRACT MicroRNAs (miRNAs) are emerging as pivotal regulators of the immune system, playing a decisive role in shaping disease resistance in chicken.
Qiangzhou Wang   +10 more
wiley   +1 more source

Novel introns, disrupting the reading frame.

open access: yes, 2015
The unspliced transcript appears to constitute the major isoform. Splicing of the listed introns disrupts the reading frame.Novel introns, disrupting the reading frame.
Konrad Schreiber (813990)   +3 more
core   +1 more source

Dysregulation of U12‐Type Splicing in Lupus Neutrophils

open access: yesArthritis &Rheumatology, EarlyView.
Objective Neutrophil dysfunction is a hallmark of systemic lupus erythematosus (SLE), but its molecular basis remains unclear. This study explores transcriptional and posttranscriptional changes in low‐density granulocytes (LDGs), a proinflammatory neutrophil subset expanded in SLE, focusing on NADPH oxidase (Nox) function and minor intron splicing ...
Luz P. Blanco   +11 more
wiley   +1 more source

Occurrence frequencies of nucleotides and dinucleotides in introns.

open access: yes, 2012
(A) Frequencies of nucleotides and dinucleotides in the first introns and non-first introns. (B) u-values of nucleotides and dinucleotides in the first introns relative to the non-first introns.
Dan Chen (32468)   +2 more
core   +1 more source

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