Results 31 to 40 of about 210,665 (290)

Mitochondrial genome annotation with MFannot: a critical analysis of gene identification and gene model prediction

open access: yesFrontiers in Plant Science, 2023
Compared to nuclear genomes, mitochondrial genomes (mitogenomes) are small and usually code for only a few dozen genes. Still, identifying genes and their structure can be challenging and time-consuming.
B. Franz Lang   +5 more
doaj   +1 more source

Complete mitogenome of the streptophyte green alga Coleochaete scutata (Coleochaetophyceae)

open access: yesMitochondrial DNA. Part B. Resources, 2019
We have sequenced the mitogenome of Coleochaete scutata strain SAG 110.80M. This mitogenome is the largest among the streptophyte green algae examined to date.
Monique Turmel   +2 more
doaj   +1 more source

Information Theory for Equalizing the Residue-Wise Information Amounts of the Proteins and Protein-Coding DNA

open access: yesProceedings, 2017
Information content of a polymeric macromolecule can be calculated in bits, by multiplying the number of building blocks that encompasses the entire length of the macromolecule with the Shannon’s entropy of each building block, which could be determined ...
Yekbun Adiguzel
doaj   +1 more source

Comparative analysis of the complete mitochondrial genomes of four cordyceps fungi

open access: yesEcology and Evolution, 2022
Cordyceps is a large group of entomogenous, medicinally important fungi. In this study, we sequenced, assembled, and annotated the entire mitochondrial genome of Ophiocordyceps xuefengensis, in addition to comparing it against other three complete ...
Can Zhong   +7 more
doaj   +1 more source

RNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcripts. [PDF]

open access: yes, 2011
Over 50% of genes in Plasmodium falciparum, the deadliest human malaria parasite, contain predicted introns, yet experimental characterization of splicing in this organism remains incomplete.
DeRisi, Joseph L   +2 more
core   +3 more sources

Conservation of Intronic Sequences in Vertebrate Mitochondrial Solute Carrier Genes (Zebrafish, Chicken, Mouse and Human)

open access: yesNon-Coding RNA, 2019
The conservation of intronic sequences was studied in the mitochondrial solute carrier (SLC25A*) genes of Zebrafish, Chicken, Mouse and Human. These genes are homologous and the coding sequences have been well conserved throughout Vertebrates, but the ...
Rosa Calvello   +4 more
doaj   +1 more source

Transcriptome Analyses of Tumor-Adjacent Somatic Tissues Reveal Genes Co-Expressed with Transposable Elements [PDF]

open access: yes, 2019
Background: Despite the long-held assumption that transposons are normally only expressed in the germ-line, recent evidence shows that transcripts of transposable element (TE) sequences are frequently found in the somatic cells.
Alberto, Adrian   +9 more
core   +2 more sources

Population Genomic Analysis Reveals a Highly Conserved Mitochondrial Genome in Fusarium asiaticum

open access: yesFrontiers in Microbiology, 2020
Fusarium asiaticum is one of the pivotal members of the Fusarium graminearum species complex (FGSC) causing Fusarium head blight (FHB) on wheat, barley and rice in large parts of Asia.
Meixin Yang   +8 more
doaj   +1 more source

Intronization, de-intronization and intron sliding are rare in Cryptococcus [PDF]

open access: yesBMC Evolutionary Biology, 2009
Eukaryotic pre-mRNA gene transcripts are processed by the spliceosome to remove portions of the transcript, called spliceosomal introns. The spliceosome recognizes intron boundaries by the presence of sequence signals (motifs) contained in the actual transcript, thus sequence changes in the genome that affect existing splicing signals or create new ...
openaire   +3 more sources

Dynamics of genomic innovation in the unicellular ancestry of animals

open access: yeseLife, 2017
Which genomic innovations underpinned the origin of multicellular animals is still an open debate. Here, we investigate this question by reconstructing the genome architecture and gene family diversity of ancestral premetazoans, aiming to date the ...
Xavier Grau-Bové   +6 more
doaj   +1 more source

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