Results 21 to 30 of about 43,079 (261)

Structural and molecular insight into the pH-induced low-permeability of the voltage-gated potassium channel Kv1.2 through dewetting of the water cavity.

open access: yesPLoS Computational Biology, 2020
Understanding the gating mechanism of ion channel proteins is key to understanding the regulation of cell signaling through these channels. Channel opening and closing are regulated by diverse environmental factors that include temperature, electrical ...
Juhwan Lee   +3 more
doaj   +1 more source

Effects of ionic strength on gating and permeation of TREK-2 K2P channels.

open access: yesPLoS ONE, 2021
In addition to the classical voltage-dependent behavior mediated by the voltage-sensing-domains (VSD) of ion channels, a growing number of voltage-dependent gating behaviors are being described in channels that lack canonical VSDs.
Linus J Conrad   +2 more
doaj   +1 more source

Hydrophobic Gating in Ion Channels

open access: yesJournal of Molecular Biology, 2015
Biological ion channels are nanoscale transmembrane pores. When water and ions are enclosed within the narrow confines of a sub-nanometer hydrophobic pore, they exhibit behavior not evident from macroscopic descriptions. At this nanoscopic level, the unfavorable interaction between the lining of a hydrophobic pore and water may lead to stochastic ...
Aryal, P, Sansom, MS, Tucker, S
openaire   +3 more sources

Energetic contributions to channel gating of residues in the muscle nicotinic receptor β1 subunit. [PDF]

open access: yesPLoS ONE, 2013
In the pentameric ligand-gated ion channel family, transmitter binds in the extracellular domain and conformational changes result in channel opening in the transmembrane domain.
Gustav Akk   +5 more
doaj   +1 more source

Markov state models of proton- and pore-dependent activation in a pentameric ligand-gated ion channel

open access: yeseLife, 2021
Ligand-gated ion channels conduct currents in response to chemical stimuli, mediating electrochemical signaling in neurons and other excitable cells.
Cathrine Bergh   +3 more
doaj   +1 more source

Gating Transition of Pentameric Ligand-Gated Ion Channels [PDF]

open access: yesBiophysical Journal, 2009
Pentameric ligand-gated ion channels are an important family of membrane proteins and play key roles in physiological processes, including signal transduction at chemical synapses. Here, we study the conformational changes associated with the opening and closing of the channel pore.
Zhu, F.   +1 more
openaire   +3 more sources

Ligand recognition and gating mechanism through three ligand-binding sites of human TRPM2 channel

open access: yeseLife, 2019
TRPM2 is critically involved in diverse physiological processes including core temperature sensing, apoptosis, and immune response. TRPM2’s activation by Ca2+ and ADP ribose (ADPR), an NAD+-metabolite produced under oxidative stress and neurodegenerative
Yihe Huang, Becca Roth, Wei Lü, Juan Du
doaj   +1 more source

Transcending Markov: non-Markovian rate processes of thermosensitive TRP ion channels

open access: yesRoyal Society Open Science, 2023
The Markov state model (MSM) is a popular theoretical tool for describing the hierarchy of time scales involved in the function of many proteins especially ion channel gating. An MSM is a particular case of the general non-Markovian model, where the rate
Yuval Ben-Abu   +2 more
doaj   +1 more source

Piezo’s membrane footprint and its contribution to mechanosensitivity

open access: yeseLife, 2018
Piezo1 is an ion channel that gates open when mechanical force is applied to a cell membrane, thus allowing cells to detect and respond to mechanical stimulation.
Christoph A Haselwandter   +1 more
doaj   +1 more source

An Unorthodox Mechanism Underlying Voltage Sensitivity of TRPV1 Ion Channel

open access: yesAdvanced Science, 2020
While the capsaicin receptor transient receptor potential vanilloid 1 (TRPV1) channel is a polymodal nociceptor for heat, capsaicin, and protons, the channel's responses to each of these stimuli are profoundly regulated by membrane potential, damping or ...
Fan Yang   +5 more
doaj   +1 more source

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