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GAUSS: a summary-statistics-based R package for accurate estimation of linkage disequilibrium for variants, Gaussian imputation, and TWAS analysis of cosmopolitan cohorts. [PDF]
Lee D, Bacanu SA.
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Functional Genetic Variation in Ubiquitin D Promoter Influences Susceptibility to Atopic Dermatitis
Clinical &Experimental Allergy, EarlyView.
Yi Ying Eliza Lim +5 more
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Linkage disequilibrium between rare mutations [PDF]
Benjamin H Good +2 more
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On the Formula for Admixture Linkage Disequilibrium
Human Heredity, 2005Admixture linkage disequilibrium (ALD), a phenomenon created by gene flow between genetically distinct populations, has for some time been used as a tool in gene mapping. It is therefore important to analyze the pattern of ALD over generations. In this study we explore two models of admixture: the gradual admixture (GA) model, in which admixture occurs
Guo, J, Fung, WK, Guo, W, Shi, N
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Linkage Disequilibrium and the Infinitesimal Limit
Theoretical Population Biology, 1997Under the classical Fisher-Bulmer infinitesimal model of quantitative genetics, the within-family distribution for an additive trait with no environmental component is Gaussian with mean at the mid-parent value and a variance which is the same for all families.
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Inferences about Linkage Disequilibrium
Biometrics, 1979Existing theory for inferences about linkage disequilibrium is restricted to a measure defined on gametic frequencies. Unless gametic frequencies are directly observable, they are inferred from genotypic frequencies under the assumption of random union of gametes.
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Linkage disequilibrium in finite populations
Theoretical and Applied Genetics, 1968A theoretical investigation has been made of the influence of population size (N) and recombination fraction (c) on linkage disequilibrium (D) between a pair of loci. Two situations were studied: (i) where both loci had no effect on fitness and (ii) where they showed heterozygote superiority, but no epistacy.If the populations are initially in linkage ...
W G, Hill, A, Robertson
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Linkage Disequilibrium or Epistasis?
Tissue Antigens, 1975M, Segall, F H, Bach
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Linkage Disequilibrium and Association Mapping
Annual Review of Genomics and Human Genetics, 2008Linkage disequilibrium refers to the association between alleles at different loci. The standard definition applies to two alleles in the same gamete, and it can be regarded as the covariance of indicator variables for the states of those two alleles. The corresponding correlation coefficient ρ is the parameter that arises naturally in discussions of ...
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