Results 41 to 50 of about 128,239 (292)

Association testing strategy for data from dense marker panels. [PDF]

PLoS ONE, 2013
Genome wide association studies have been usually analyzed in a univariate manner. The commonly used univariate tests have one degree of freedom and assume an additive mode of inheritance.
Donghyung Lee, Silviu-Alin Bacanu
doaj   +1 more source

Linkage Disequilibrium and Association Analysis [PDF]

, 2021
This chapter considers allelic association to be association occurring between alleles at different loci. Allelic association can occur between linked or unlinked loci. There are many different measures of linkage disequilibrium.
Chung, Ren‐Hua, Ren‐Hua Chung, Eden R. Martin, Martin, Eden R   +3 more
core   +3 more sources

Including copy number variation in association studies to predict genotypic values [PDF]

, 2010
The objective of this study was to investigate, both empirically and deterministically, the ability to explain genetic variation resulting from a copy number polymorphism (CNP) by including the CNP, either by its genotype or by a continuous derivation ...
Calus, M.P.L., Haley, C.S., Koning, de, D.J.   +2 more
core   +1 more source

SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines

BMC Genetics, 2002
Background Recent studies of ancestral maize populations indicate that linkage disequilibrium tends to dissipate rapidly, sometimes within 100 bp. We set out to examine the linkage disequilibrium and diversity in maize elite inbred lines, which have been
Smith Oscar, Dolan Maurine, Jung Mark, Caldwell Katherine S, Ching Ada, Tingey Scott, Morgante Michele, Rafalski Antoni J   +7 more
doaj   +1 more source

Highly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine

BMC Genomics, 2017
Background Atlantic cod (Gadus morhua), is known to vary genetically across the North Atlantic, Greenland, and Newfoundland. This genetic variation occurs both spatially and temporally through decades of heavy fishing, and is concentrated in three ...
Bryan T. Barney, Christiane Munkholm, David R. Walt, Stephen R. Palumbi   +3 more
doaj   +1 more source

Pair-wise linkage disequilibrium. [PDF]

, 2016
Pair-wise linkage disequilibrium.
Jerome Carayol (2551681), Gregory Lefebvre (77343), Jacques Vervoort (225685), Jörg Hager (85462), Marie-Pier Scott-Boyer (2551678), Parastoo Fazelzadeh (1392481), Melissa Morine (2551684), Arne Astrup (37672), Armand Valsesia (41439), Celine Charon (2551675), Alice Matone (451692), Wim H. M. Saris (37674)   +11 more
core   +1 more source

Results of linkage disequilibrium analysis. [PDF]

, 2022
Results of linkage disequilibrium analysis.
Mathilde Allegre (13919723), Gillian G. Bidaisee (13919720), Michel Boccara (121919), Duraisamy Saravanakumar (13919726), Olivier Fouet (121913), Xavier Argout (68581), Isaac Bekele (13919729), Frances L. Bekele (13919717), Claire Lanaud (121926)   +8 more
core   +1 more source

eQTL Meta‐Analysis Reveals Conserved and Population‐Specific Regulatory Variation Underlying Nutritional Trait Evolution and Domestication in Tomato

Advanced Science, EarlyView.
A comprehensive meta‐analysis of expression quantitative trait loci (eQTLs) across five diverse tomato populations reveals a high‐resolution atlas of transcriptional regulation and uncovers conserved and population‐specific regulatory architectures underlying fruit nutritional quality traits, including flavonoids, sugars, organic acids, carotenoids ...
Jiantao Zhao, Xin Wang, Jing Zhang, Ryan McQuinn, Je Min Lee, Itay Gonda, Ari Feder, Yimin Xu, Baike Wang, Qinghui Yu, Denise M. Tieman, Sanwen Huang, Harry Klee, James J. Giovannoni, Zhangjun Fei   +14 more
wiley   +1 more source

Linkage disequilibrium (LD) estimates. [PDF]

, 2019
Linkage disequilibrium (LD) estimates.
Valeria Beaufort (6894140), Viviana Echenique (3932159), Susanne Dreisigacker (3109845), Pablo Federico Roncallo (6894137), Adelina Olga Larsen (6894143)   +4 more
core   +1 more source

Long‐Term Ambient Benzene Exposure and Brain Disorders Among Urban Adults: Effect Modification by Genetic Susceptibility and Potential Mediation by Plasma Proteins

Advanced Science, EarlyView.
Low‐level ambient benzene exposure is associated with increased risks of multiple brain disorders in urban adults. Genetic susceptibility modifies these associations, while plasma proteomics points to potential biological pathways linking benzene exposure to adverse brain health.
Jianhui Guo, Xia Zhong, Petros Koutrakis, Carolina L. Zilli Vieira, Feifei Si, Yaqi Wang, Xinyao Lian, Yi Fan, Zhaokun Wang, Shaodan Huang, Jing Li   +10 more
wiley   +1 more source