Results 101 to 110 of about 64,353 (185)

CRISPR/Cas13 sgRNA‐Mediated RNA–RNA Interaction Mapping in Live Cells with APOBEC RNA Editing

Advanced Science
Current research on long non‐coding RNA (lncRNA) has predominantly focused on identifying their protein partners and genomic binding sites, leaving their RNA partners largely unknown.
Li‐Ting Diao, Shu‐Juan Xie, Wan‐Yi Xu, Hai‐Hui Zhang, Ya‐Rui Hou, Yan‐Xia Hu, Xin‐Xiang Liang, Jun‐Bin Liang, Qi Zhang, Zhen‐Dong Xiao   +9 more
doaj   +1 more source

Analysis of long noncoding gene expression and its interactions with protein-coding genes in vascular endothelial cells in keloids

European Journal of Medical Research
Objectives The purpose of this study was to determine the relationship between protein-coding RNA (messenger RNA, mRNA) and long noncoding RNA (lncRNA) expressed in vascular endothelial cells (VECs) in keloids by reanalyzing Gene Expression Omnibus (GEO)
Yunxiang Luo, Zi Ye, Yi Li, Chau Wei Wong, Shuqia Xu, Yu Deng, Zhicheng Su, Xueqing Li, Yingxiong Huang, Bing Han   +9 more
doaj   +1 more source

Identification of lncRNAs in peripheral blood mononuclear cells associated with sepsis immunosuppression based on weighted gene co-expression network analysis

Hereditas
Background Sepsis-induced immunosuppression involves complex molecular mechanisms, including dysregulated long noncoding RNAs (lncRNAs), which remain poorly understood. Objective We aimed to identify immunosuppression-related lncRNAs and their functional
Wenjia Zhang, Yan Li, Gang Li, Aijia Zhang, Wende Sun   +4 more
doaj   +1 more source

lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs. [PDF]

, 2013
Although recent studies have indicated roles of long non-coding RNAs (lncRNAs) in physiological aspects of cell-type determination and tissue homeostasis, their potential involvement in regulated gene transcription programs remains rather poorly ...
Evans, Christopher P, Jin, Chunyu, Li, Wenbo, Lin, Chunru, Meng, Da, Merkurjev, Daria, Ohgi, Kenneth A, Rosenfeld, Michael G, Tanasa, Bogdan, Yang, Joy C, Yang, Liuqing, Zhang, Jie   +11 more
core  

LPItabformer: Enhancing generalization in predicting lncRNA-protein interactions via a tabular Transformer

Computational and Structural Biotechnology Journal
Long-noncoding RNAs (LncRNAs) play important roles in physiological and pathological processes. Accurately predicting lncRNA-protein interactions (LPIs) is vital strategy for clarify functions and pathogenic mechanisms of lncRNAs. Current computational methods for evaluating LPIs with their utility and generalization have significant room for ...
Qin Lin, Jie Sheng, Chang Zhou, Tao Xiao, Yilei Meng, Mingxin Lu, Junfang Zhang, Xueyun Yan, Luying Peng, Huaming Cao, Li Li   +10 more
openaire   +2 more sources

Icariin inhibits proliferation and migration of VSMCs via LncRNA H19 competitively binding to HuR

Scientific Reports
Developing new anti-atherosclerotic agents and exploring their mechanistic actions is required. This study defined the molecular mechanism of icariin (ICA) in human aortic smooth muscle cells (HA-VSMCs) proliferation and migration by focusing on lncRNA ...
Yibing Zhang, Peng Huang, Min Li, Zhimin Fan   +3 more
doaj   +1 more source

Quantitative Proteomics Analysis Reveals the Potential Role of lncRNA FTX in Endothelial Cells

Frontiers in Bioscience-Landmark
Objective: This study investigated the role of long non-coding RNAs (lncRNAs) FTX in vascular endothelial cells (ECs). Methods: Transfection of FTX/Sh-FTX with lentivirus was used to construct gain and loss of function cell models in human umbilical vein
Qi Zhao, Yadi Lan, Xiuju Shi, Xiangfei Sun   +3 more
doaj   +1 more source

IRWNRLPI: Integrating Random Walk and Neighborhood Regularized Logistic Matrix Factorization for lncRNA-Protein Interaction Prediction. [PDF]

Front Genet, 2018
Zhao Q, Zhang Y, Hu H, Ren G, Zhang W, Liu H.   +5 more
europepmc   +1 more source

LncPTPred: predicting lncRNA-protein interaction based on crosslinking and immunoprecipitation (CLIP-Seq) data. [PDF]

Brief Bioinform
Das G, Das T, Ghosh Z.
europepmc   +1 more source

Inter-view contrastive learning and miRNA fusion for lncRNA-protein interaction prediction in heterogeneous graphs. [PDF]

Brief Bioinform
Mao Y, Wu J, Weng J, Li M, Xiong Y, Gu W, Jiang R, Pang R, Lin X, Tang D.   +9 more
europepmc   +1 more source