Results 41 to 50 of about 34,200 (200)

Differential nuclease sensitivity profiling uncovers a drought responsive change in maize leaf chromatin structure for two large retrotransposon derivatives, Uloh and Vegu

open access: yesPlant Direct, 2021
Plant chromatin dynamics are generally recognized as playing a role in the genomic response to environmental stress. Although stress‐induced transcriptional activities of LTR‐retrotransposons have been reported, whether the stress response can be ...
Minkyu Park   +6 more
doaj   +1 more source

LTR-retrotransposons in R. exoculata and other crustaceans [PDF]

open access: yes, 2013
Transposable elements are major constituents of eukaryote genomes and have a great impact on genome structure and stability. They can contribute to the genetic diversity and evolution of organisms. Knowledge of their distribution among several genomes is
Graça, Paula   +5 more
core   +1 more source

Lost in translation : The biogenesis of non-LTR retrotransposon proteins [PDF]

open access: yes, 2013
This research was supported by UK Biotechnology and Biological Sciences Research Council (BBSRC) and the Wellcome Trust.“Young” APE-type non-LTR retrotransposons (non-LTRs) typically encode two open reading frames (ORFs 1 and 2).
Roulston, Claire   +11 more
core   +1 more source

Chromodomains and LTR retrotransposons in plants [PDF]

open access: yesCommunicative & Integrative Biology, 2009
A chromodomain is a domain contained in various proteins involved in chromatin remodeling and the regulation of gene expression in eukaryotes during development. Chromodomains perform a wide range of diverse functions including chromatin targeting and interactions between different proteins, RNA and DNA.
openaire   +2 more sources

APE-type non-LTR retrotransposons of multicellular organisms encode virus-like 2A oligopeptide sequences, which mediate translational recoding during protein synthesis [PDF]

open access: yes, 2013
2A oligopeptide sequences (“2As”) mediate a cotranslational recoding event termed “ribosome skipping.” Previously we demonstrated the activity of 2As (and “2A-like sequences”) within a wide range of animal RNA virus genomes and non-long terminal repeat ...
Sukhodub, Andriy   +17 more
core   +1 more source

Non-LTR retrotransposons and microsatellites [PDF]

open access: yesMobile Genetic Elements, 2013
The human genome is laden with both non-LTR (long-terminal repeat) retrotransposons and microsatellite repeats. Both types of sequences are able to, either actively or passively, mutagenize the genomes of human individuals and are therefore poised to dynamically alter the human genomic landscape across generations.
Grandi, Fiorella C., An, Wenfeng
openaire   +2 more sources

Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants

open access: yesBMC Genomics, 2010
Background Chromodomain-containing Gypsy LTR retrotransposons or chromoviruses are widely distributed among eukaryotes and have been found in plants, fungi and vertebrates.
Blinov Alexander   +2 more
doaj   +1 more source

Genome-wide survey and comparative analysis of LTR retrotransposons and their captured genes in rice and sorghum. [PDF]

open access: yesPLoS ONE, 2013
Long terminal repeat (LTR) retrotransposons are the major class I mobile elements in plants. They play crucial roles in gene expansion, diversification and evolution.
Shu-Ye Jiang, Srinivasan Ramachandran
doaj   +1 more source

A specific insertion of a solo-LTR characterizes the Y chromosome of Bryonia dioica (Cucurbitaceae) [PDF]

open access: yes, 2010
Background: Relatively few species of flowering plants are dioecious and even fewer are known to have sex chromosomes. Current theory posits that homomorphic sex chromosomes, such as found in Bryonia dioica (Cucurbitaceae), offer insight into the early ...
Silber, Martina V.   +8 more
core   +1 more source

LTR-LTR ages and terminal branch length ages for LTR retrotransposons.

open access: yes, 2021
Ages in 10,000 year bins across each of the largest 10 families of each superfamily with at least 10 copies. Left plots (A-D) show LTR-LTR ages, right plots (E-H) show terminal branch length (TBL) ages. (A) all copies, LTR-LTR, (B) RLC families, LTR-LTR,
Nathan M. Springer (7359848)   +3 more
core   +1 more source

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