Isolation of a transcriptionally active element of high copy number retrotransposons in sweetpotato genome [PDF]
Many plant retrotransposons have been characterized, but only three families (Tnt1, Tto1 and Tos17) have been demonstrated to be transpositionally competent.
Yamashita, Hiroki +6 more
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The analysis of Circe, an LTR retrotransposon of Drosophila melanogaster, suggests that an insertion of non-LTR retrotransposons into LTR elements can create chimeric retroelements [PDF]
Circe is a transposable element recently identified in Drosophila melanogaster which appears to be mostly associated with the constitutive heterochromatin. This element shows the structural features of a long terminal repeat (LTR)-containing retrotransposon: It is flanked by 240-bp-long terminal repeats, and its two open reading frames encode putative ...
A, Losada +3 more
openaire +2 more sources
The diversity of LTR retrotransposons.
Eukaryotic genomes are full of long terminal repeat (LTR) retrotransposons. Although most LTR retrotransposons have common structural features and encode similar genes, there is nonetheless considerable diversity in their genomic organization, reflecting the different strategies they use to proliferate within the genomes of their hosts.
Havecker, Ericka R +2 more
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LTR retrotransposons and the evolution of dosage compensation in Drosophila [PDF]
Dosage compensation in Drosophila is the epigenetic process by which the expression of genes located on the single X-chromosome of males is elevated to equal the expression of X-linked genes in females where there are two copies of the X-chromosome. While epigenetic mechanisms are hypothesized to have evolved originally to silence transposable elements,
Matyunina, Lilya V. +2 more
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Hypermethylated LTR retrotransposon exhibits enhancer activity [PDF]
LTR retrotransposons are repetitive DNA elements comprising ∼10% of the human genome. They are silenced by hypermethylation of cytosines in CpG dinucleotides and are considered parasitic DNA serving no useful function for the host genome. However, hypermethylated LTRs contain enhancer and promoter sequences and can promote tissue-specific transcription
Tianxiang Hu +5 more
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Reverse Transcription of Retroviruses and LTR Retrotransposons [PDF]
ABSTRACT The enzyme reverse transcriptase (RT) was discovered in retroviruses almost 50 years ago. The demonstration that other types of viruses, and what are now called retrotransposons, also replicated using an enzyme that could copy RNA into DNA came a few years later.
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Evolutionary History of LTR Retrotransposon Chromodomains in Plants [PDF]
Chromodomain-containing LTR retrotransposons are one of the most successful groups of mobile elements in plant genomes. Previously, we demonstrated that two types of chromodomains (CHDs) are carried by plant LTR retrotransposons. Chromodomains from group I (CHD_I) were detected only in Tcn1-like LTR retrotransposons from nonseed plants such as mosses ...
Anton Novikov +2 more
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Transposable Element–Driven PIEZO Mutation Enhances Locust Flight in Plateau Hypoxia
Why transposable elements (TEs) persisted or expanded in genomes remains a mystery. Using integrated analysis of TE macro‐ and microevolution in locusts, our results showed that thousands of TE insertions promoted widespread adaptive variation. Subfamilies of candidate adaptive TEs amplified and reshaped species‐level genomic architecture.
Xuanzhao Li +8 more
wiley +1 more source
This study reveals that long non‐coding RNAs represent important regulatory components underlying pear domestication and improvement. Integrative multi‐omics analyses identify selected lncRNAs associated with fruit traits, while functional validation uncovers a lignin‐related lncRNA, lncRNA‐pys, that promotes lignin accumulation.
Bobo Song +9 more
wiley +1 more source
Poster: Flying non-LTR retrotransposons.
Poster presented at Frontiers of Retrovirology'09 Flying non-LTR retrotransposons: DNA transposons as freely available “wings”? Olga Novikova, Alexander Blinov Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Horizontal transmission (HT ...
Olga Novikova (100453)
core +1 more source

