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SoyTEdb: a comprehensive database of transposable elements in the soybean genome [PDF]

open access: yesBMC Genomics, 2010
Background Transposable elements are the most abundant components of all characterized genomes of higher eukaryotes. It has been documented that these elements not only contribute to the shaping and reshaping of their host genomes, but also play ...
Zhu Liucun   +6 more
doaj   +5 more sources

Paired-end mappability of transposable elements in the human genome [PDF]

open access: yesMobile DNA, 2019
Though transposable elements make up around half of the human genome, the repetitive nature of their sequences makes it difficult to accurately align conventional sequencing reads.
Corinne E. Sexton, Mira V. Han
doaj   +3 more sources

Transposable Elements, Inflammation, and Neurological Disease [PDF]

open access: yesFrontiers in Neurology, 2019
Transposable Elements (TE) are mobile DNA elements that can replicate and insert themselves into different locations within the host genome. Their propensity to self-propagate has a myriad of consequences and yet their biological significance is not well-
Aurian Saleh   +2 more
doaj   +3 more sources

Integrating transposable elements in the 3D genome [PDF]

open access: yesMobile DNA, 2020
Chromosome organisation is increasingly recognised as an essential component of genome regulation, cell fate and cell health. Within the realm of transposable elements (TEs) however, the spatial information of how genomes are folded is still only rarely ...
Alexandros Bousios   +3 more
doaj   +6 more sources

Transposable elements in Drosophila [PDF]

open access: yesMobile DNA, 2020
Drosophila has been studied as a biological model for many years and many discoveries in biology rely on this species. Research on transposable elements (TEs) is not an exception.
Vincent Mérel   +3 more
doaj   +4 more sources

The repetitive genome of the Ixodes ricinus tick reveals transposable elements have driven genome evolution in ticks [PDF]

open access: yesGenome Biology
Background Ticks are obligate blood-feeding parasites associated with a huge diversity of diseases globally. The hard tick Ixodes ricinus is the key vector of Lyme borreliosis and tick-borne encephalitis in Western Eurasia.
Isobel Ronai   +9 more
doaj   +2 more sources

Transposable elements

open access: yesCurrent Biology, 2022
Transposable elements are known by many names, including 'transposons', 'interspersed repeats', 'selfish genetic elements', 'jumping genes', and 'parasitic DNA', but here we will refer to them simply as transposable elements. Many biologists will have heard of transposable elements and their ability to transpose (change position) within the genome. But
Hayward, Alexandre, Gilbert, Clement
  +6 more sources

Dynamic dosage changes in X-linked transposable elements during mammalian dosage compensation [PDF]

open access: yesNature Communications
In mammals, X-linked dosage compensation involves X-chromosome inactivation to balance X chromosome dosage between males and females, and hyperactivation of the remaining X-chromosome (Xa-hyperactivation) to achieve X-autosome balance in both sexes ...
Chunyao Wei   +5 more
doaj   +2 more sources

Combined analysis of transposable elements and structural variation in maize genomes reveals genome contraction outpaces expansion.

open access: yesPLoS Genetics, 2023
Structural differences between genomes are a major source of genetic variation that contributes to phenotypic differences. Transposable elements, mobile genetic sequences capable of increasing their copy number and propagating themselves within genomes ...
Manisha Munasinghe   +8 more
doaj   +1 more source

Perspective for Studying the Relationship of miRNAs with Transposable Elements

open access: yesCurrent Issues in Molecular Biology, 2023
Transposable elements are important sources of miRNA, long non-coding RNAs genes, and their targets in the composition of protein-coding genes in plants and animals.
Rustam Nailevich Mustafin   +1 more
doaj   +1 more source

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