Results 11 to 20 of about 30,204 (224)

The evaluation of shotgun sequencing and rpoB metabarcoding for taxonomic profiling of bacterial communities

open access: yesBMC Microbiology
Background The importance of microbial community profiling has been increasingly recognized in biological and environmental research. While metabarcoding has been widely used for such analysis by targeting specific DNA sequences as markers, shotgun ...
Karine Durand   +2 more
doaj   +2 more sources

The value of twinned pollinator-pollen metabarcoding: Bumblebee pollination service is weakly partitioned within a UK grassland community [PDF]

open access: yes, 2023
Predicting ecological impact of declining bumblebee (Bombus) populations requires better understanding of interactions between pollinator partitioning of floral resources and plant partitioning of pollinator resources. Here, we combine Cytochrome Oxidase
Joël Allanguillaume   +13 more
core   +1 more source

Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods [PDF]

open access: yes, 2023
Biodiversity is declining at alarming rates worldwide and large-scale monitoring is urgently needed to understand changes and their drivers. While classical taxonomic identification of species is time and labour intensive, the combination with DNA-based ...
Dieker,Petra   +9 more
core   +1 more source

Phytoplankton metabarcoding

open access: yes, 2023
The presentation, delivered at the BIOLAWEB Workshop "Metabarcoding of diatoms and phytoplankton for biomonitoring" (March 2023) provides a comprehensive workflow for phytoplankton DNA metabarcoding, from barcode selection and primer design to sampling ...
Lemonnier, Clarisse
core   +4 more sources

Recommendations for the preservation of environmental samples in diatom metabarcoding studies [Elektronisk resurs]

open access: yes, 2022
Implementation of DNA metabarcoding for diatoms for environmental monitoring is now moving from a research to an operational phase, requiring rigorous guidelines and standards.
Sveriges lantbruksuniversitet.   +1 more
core   +1 more source

Evaluation of non-destructive DNA extraction protocols for insect metabarcoding: gentler and shorter is better [Elektronisk resurs]

open access: yes, 2022
DNA metabarcoding can accelerate research on insect diversity, as it is cheap and fast compared to manual sorting and identification. Most metabarcoding protocols require homogenisation of the sample, preventing further work on the specimens.
Sveriges lantbruksuniversitet.   +1 more
core   +1 more source

Environmental Status Assessment Using DNA Metabarcoding: Towards a Genetics Based Marine Biotic Index (gAMBI) [PDF]

open access: yes, 2014
Aylagas, E., Á. Borja, N. Rodríguez-Ezpeleta, 2014. Environmental Status Assessment Using DNA Metabarcoding: Towards a Genetics Based Marine Biotic Index (gAMBI). PLoS ONE, 9(3): e90529.
Rodríguez-Ezpeleta, Naiara   +5 more
core   +2 more sources

Comparison of mechanical sorting and DNA metabarcoding for diet analysis with fresh and degraded wolf scats

open access: yesEcosphere, 2021
DNA metabarcoding has become a powerful technique for identifying the species present in a bulk environmental sample. The application of DNA metabarcoding to wildlife diet analysis is a particularly promising tool for exploring trophic interactions.
Aimee L. Massey   +4 more
doaj   +1 more source

Metabarcoding is powerful yet still blind : a comparative analysis of morphological and molecular surveys of seagrass communities [PDF]

open access: yes, 2015
In the context of the sixth wave of extinction, reliable surveys of biodiversity are increasingly needed to infer the cause and consequences of species and community declines, identify early warning indicators of tipping points, and provide reliable ...
Grall, J.   +27 more
core   +2 more sources

zjgold/Scorpion-SMR-eDNA-Metabarcoding: eDNA metabarcoding as a biomonitoring tool for marine protected areas 1.0

open access: yes, 2021
<p>eDNA metabarcoding as a biomonitoring tool for marine protected areas</p ...
Zack Gold
core   +1 more source

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