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How quantitative is metabarcoding: A meta‐analytical approach [PDF]
AbstractMetabarcoding has been used in a range of ecological applications such as taxonomic assignment, dietary analysis and the analysis of environmental DNA. However, after a decade of use in these applications there is little consensus on the extent to which proportions of reads generated corresponds to the original proportions of species in a ...
Philip D. Lamb +5 more
openaire +4 more sources
Phytoplankton metabarcoding - 4th part
The presentation, delivered at the BIOLAWEB Workshop "Metabarcoding of diatoms and phytoplankton for biomonitoring" (March 2023) centers on the Phytool reference library and comparative testing of DNA metabarcoding against traditional microscopy for lake
Alric, Benjamin
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Comparison of Metabarcoding Techniques for Dietary Assessment in Herbivores and Omnivores [PDF]
Dietary assessment plays a crucial role in comprehending the ecological dynamics and nutritional needs of herbivores and omnivores. The metabarcoding technique has emerged as a potent tool for exploring the dietary composition of these animals.
Hartini Sariyati Nur +10 more
doaj +1 more source
Metabarcoding and environmental sequencing projects
The thesis explores the use of metabarcoding in projects uncovering biological diversity and its applications in various fields of biology. The thesis provides an overview of the principles and workflow of metabarcoding, including the choice of specific ...
Kandaurova, Ekaterina
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Diatoms metabarcoding: Intercalibration
The presentation, delivered at the BIOLAWEB Workshop "Metabarcoding of diatoms and phytoplankton for biomonitoring" (March 2023) provides results from a European intercalibration exercise (RING-TEST) designed to assess the transferability and variability
Bouchez, Agnès
core
DNA-based monitoring methods are potentially faster and cheaper compared to traditional morphological benthic identification. DNA metabarcoding involves various methodological choices which can introduce bias leading to a different outcome in ...
Van den Bulcke,Laure +18 more
core +1 more source
Comparative analysis of eDNA metabarcoding and eDNA metagenomics for fish biodiversity estimates using standard and novel filtration methods [PDF]
Molecular techniques involving environmental DNA (eDNA) are increasingly used for aquatic species detection. Metabarcoding, a widely adopted technique, suffers from primer bias: uneven amplification of species due to primer mismatches. Primer bias can be
Daniël van Berkel +4 more
doaj +3 more sources
Efficacy of metabarcoding for identification of fish eggs evaluated with mock communities
There is urgent need for effective and efficient monitoring of marine fish populations. Monitoring eggs and larval fish may be more informative than that traditional fish surveys since ichthyoplankton surveys reveal the reproductive activities of fish ...
Elena M. Duke, Ronald S. Burton
doaj +1 more source
Benchmarking DNA Metabarcoding for Biodiversity-Based Monitoring and Assessment
Characterization of biodiversity has been extensively used to confidently monitor and assess environmental status. Yet, visual morphology, traditionally and widely used for species identification in coastal and marine ecosystem communities, is tedious ...
Borja, Ángel +7 more
core +1 more source
Comparativa de métodos y mapeo de capacidades
Presentación realizada en el Curso de capacitación teórico - demostrativo - "Monitoreo de la biodiversidad con metabarcoding" organizado por el Instituto Humboldt los días 24 al 27 de noviembre del año 2020.
Franco-Sierra, Nicolas D.
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