Results 61 to 70 of about 12,672 (167)

Unraveling Fish Community Diversity and Structure in the Yellow Sea: Evidence from Environmental DNA Metabarcoding and Bottom Trawling

Animals
The use of environmental DNA (eDNA) metabarcoding to analyze fish species diversity across different aquatic ecosystems is well documented. Nonetheless, there is a gap in validating eDNA metabarcoding studies on the diversity and structure of fish ...
Jinyong Zhang, Xiaoyu Cui, Lin Lin, Yuan Liu, Jinqing Ye, Weiyue Zhang, Hongjun Li   +6 more
doaj   +1 more source

Evaluation and application of eDNA metabarcoding primers of fish: A case study in an estuarine ecosystem

Global Ecology and Conservation
The selection of primers is crucial for conducting eDNA metabarcoding studies, particularly in estuarine regions characterized by complex habitats and high fish diversity. However, most previous eDNA metabarcoding studies have not systematically screened
Jiabo Chen, Wei Feng, Guanlin Chen, Haimei Lin, Yuting Hu, Jujing Wang, Xiao Chen, Lei Zhou, Jinping Cheng, Yihong Chen, Jack Chi-Ho Ip, Jun Zhao, Junjie Wang   +12 more
doaj   +1 more source

NAMERS: a purpose-built reference DNA sequence database to support applied eDNA metabarcoding [PDF]

Metabarcoding and Metagenomics
Applied eDNA metabarcoding is increasingly being considered as a tool to inform management decisions, regulations, or policy development. Because these downstream considerations are coming to the forefront of eDNA applications, optimizing workflow ...
Kristen M. Westfall, Gregory A. C. Singer, Muneesh Kaushal, Scott R. Gilmore, Nicole Fahner, Mehrdad Hajibabaei, Cathryn L. Abbott   +6 more
doaj   +3 more sources

Comparing modern identification methods for wild bees: Metabarcoding and image-based morphological taxonomic assignment.

PLoS ONE
With the decline of bee populations worldwide, studies determining current wild bee distributions and diversity are increasingly important. Wild bee identification is often completed by experienced taxonomists or by genetic analysis.
Cassandra D Smith, Robert S Cornman, Jennifer A Fike, Johanna M Kraus, Sara J Oyler-McCance, Carrie E Givens, Michelle L Hladik, Mark W Vandever, Dana W Kolpin, Kelly L Smalling   +9 more
doaj   +1 more source

Cyanobacteria in Waterbodies of the Biggest Anthropogenic Agglomeration: Combined DNA Metabarcoding, Microscopy, and Culture Analysis

Phycology
This study describes the results of integrative analysis of cyanobacterial communities in waterbodies of Moscow, Russia. 16S rRNA V3–V4 metabarcoding and light microscopy are implemented to investigate the diversity, abundance, and distribution of ...
Elena Kezlya, Elina Mironova, Ekaterina Voyakina, Sergey Kravchenko, Andrei Mironov, Vasilii Kuzmin, Ekaterina Chernova, Anton Iurmanov, Yevhen Maltsev, Maxim Kulikovskiy   +9 more
doaj   +1 more source

The evaluation of shotgun sequencing and rpoB metabarcoding for taxonomic profiling of bacterial communities

BMC Microbiology
Background The importance of microbial community profiling has been increasingly recognized in biological and environmental research. While metabarcoding has been widely used for such analysis by targeting specific DNA sequences as markers, shotgun ...
Karine Durand, Jean-Claude Ogier, Kiwoong Nam   +2 more
doaj   +1 more source

Trends in DNA Barcoding and Metabarcoding [PDF]

Genome, 2019
openaire   +2 more sources

Trends in DNA Barcoding and Metabarcoding 2020 [PDF]

Genome, 2021
openaire   +2 more sources

Unveiling Vertebrate Biodiversity in Arid and Semi‐Arid Terrestrial Ecosystems Through eDNA Metabarcoding at Savanna Waterholes

Evolutionary Applications
Applying environmental DNA (eDNA) metabarcoding to samples from waterholes and their surroundings offers a promising approach for monitoring terrestrial vertebrates in semi‐arid and arid ecosystems, such as the southern African savannas. However, minimal
Tamara Schenekar, Janine Baxter, Irmgard Sedlmayr, Julia Gladitsch, Sibusiso Mahlangu, Monica Mwale   +5 more
doaj   +1 more source

Assessment of Insect Communities with Metabarcoding

Abstract Metabarcoding is widely used for molecular identification of organisms. Due to its efficiency for en masse characterization of samples, the technique is useful for insect biodiversity surveys.
Hendra F. Sihaloho, Isham Azhar, Millawati Gani, Juliana Senawi, Lim Shu Yong, Qasim Ayub, Rahul De, Tigga Kingston, Caleb D. Phillips   +8 more
openaire   +1 more source