Results 51 to 60 of about 37,918 (308)

An assessment of the genus Columbella Lamarck, 1799 (Gastropoda: Columbellidae) from eastern Atlantic [PDF]

open access: yes, 2017
Three species of the neogastropod genus Columbella Lamarck, 1799 are recognised from the northeastern Atlantic and the Mediterranean. One is the common Mediterranean C.
Demaintenon, Marta J.   +4 more
core   +2 more sources

Diet contributes to urban-induced alterations in gut microbiota : experimental evidence from a wild passerine [PDF]

open access: yes, 2020
Urban sprawl increasingly affects the ecology of natural populations, including host-microbiota interactions, with observed differences in the gut microbiota between urban and rural hosts.
De Neve, Liesbeth   +5 more
core   +1 more source

Unearthing soil arthropod diversity through DNA metabarcoding

open access: yesPeerJ, 2022
DNA metabarcoding has the potential to greatly advance understanding of soil biodiversity, but this approach has seen limited application for the most abundant and species-rich group of soil fauna–the arthropods. This study begins to address this gap by comparing information on species composition recovered from metabarcoding two types of bulk samples (
Monica R. Young, Paul D. N. Hebert
openaire   +3 more sources

Arbuscular mycorrhizal fungal community abundance, functions, and symbiotic interactions revealed by root metatranscriptomes

open access: yesiMetaOmics, EarlyView.
Paradigm shift: PCR‐free methods reveal 6–15‐fold higher arbuscular mycorrhizal (AM) fungal abundance than metabarcoding, exposing systematic underestimation across decades of research. Predictive power: AM fungal abundance serves as a community‐level trait that predicts crop yield under drought conditions.
Peilin Chen, John W. Taylor, Cheng Gao
wiley   +1 more source

Metabarcoding From Microbes to Mammals: Comprehensive Bioassessment on a Global Scale

open access: yesFrontiers in Ecology and Evolution, 2020
Global biodiversity loss is unprecedented, and threats to existing biodiversity are growing. Given pervasive global change, a major challenge facing resource managers is a lack of scalable tools to rapidly and consistently measure Earth's biodiversity ...
Zacchaeus G. Compson   +5 more
doaj   +1 more source

The applicability of eDNA metabarcoding approaches for sessile benthic surveying in the Kimberley region, north‐western Australia

open access: yesEnvironmental DNA, 2022
The application of environmental DNA technologies is a promising new approach to rapidly audit biodiversity across large‐scale, remote regions. Here, we examine the efficacy of a dual‐assay eDNA metabarcoding approach for sessile benthic bioassessments ...
Katrina M. West   +6 more
doaj   +1 more source

Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status [PDF]

open access: yes, 2017
Danovaro, Roberto ... et al.-- 25 pages, 9 figures, 2 tablesMarine environmental monitoring has tended to focus on site-specific methods of investigation.
Borja, Ángel   +5 more
core   +1 more source

Metabarcoding a diverse arthropod mock community

open access: yesMolecular Ecology Resources, 2019
Abstract Although DNA metabarcoding is an attractive approach for monitoring biodiversity, it is often difficult to detect all the species present in a bulk sample. In particular, sequence recovery for a given species depends on its biomass and mitome copy number as well as the primer set employed for PCR.
Thomas W. A. Braukmann   +9 more
openaire   +2 more sources

Diversity and random forest models of oral microbiomes in periodontal health using publicly available data

open access: yesJournal of Periodontology, EarlyView.
Abstract Background Evidence on the 16S metabarcoding of supragingival, subgingival, and salivary microbiomes in periodontal health remains limited. We aimed to analyze the diversity and potential of machine‐learning models of supragingival, subgingival, and salivary microbiomes in periodontal health. Methods A total of 848 samples (supragingival = 210;
Alba Regueira‐Iglesias   +6 more
wiley   +1 more source

Environmental DNA Metabarcoding Detects Predators at Higher Rates Than Electrofishing

open access: yesEnvironmental DNA
There are numerous downsides and risks associated with electrofishing; hence, environmental DNA (eDNA) metabarcoding is becoming increasingly common in aquatic ecological studies.
Eric A. Bonk   +3 more
doaj   +1 more source

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