Results 31 to 40 of about 450,408 (297)

Limited Mechanistic Link Between the Monod Equation and Methanogen Growth: a Perspective from Metabolic Modeling

open access: yesMicrobiology Spectrum, 2022
The Monod equation has been widely applied as the general rate law of microbial growth, but its applications are not always successful. By drawing on the frameworks of kinetic and stoichiometric metabolic models and metabolic control analysis, the ...
Qusheng Jin   +3 more
doaj   +1 more source

Influence of oxygen concentration on the metabolism of Penicillium chrysogenum

open access: yesEngineering in Life Sciences, 2023
In large‐scale bioreactors, there is often insufficient mixing and as a consequence, cells experience uneven substrate and oxygen levels that influence product formation.
Agnes Janoska   +5 more
doaj   +1 more source

Metabolic Modeling of the C3-CAM Continuum Revealed the Establishment of a Starch/Sugar-Malate Cycle in CAM Evolution

open access: yesFrontiers in Plant Science, 2021
The evolution of Crassulacean acid metabolism (CAM) is thought to be along a C3-CAM continuum including multiple variations of CAM such as CAM cycling and CAM idling.
Ignacius Y. Y. Tay   +2 more
doaj   +1 more source

The Impacts of Domestication and Agricultural Practices on Legume Nutrient Acquisition Through Symbiosis With Rhizobia and Arbuscular Mycorrhizal Fungi

open access: yesFrontiers in Genetics, 2020
Legumes are unique among plants as they can obtain nitrogen through symbiosis with nitrogen-fixing rhizobia that form root nodules in the host plants. Therefore they are valuable crops for sustainable agriculture.
Ailin Liu   +3 more
doaj   +1 more source

In vivo gene expression profile of Haemophilus influenzae during human pneumonia

open access: yesMicrobiology Spectrum, 2023
Haemophilus influenzae is a major cause of community-acquired pneumonia. While studied extensively in various laboratory models, less is known about the cell function while inside the human lung.
Linnea Polland   +3 more
doaj   +1 more source

μBialSim: Constraint-Based Dynamic Simulation of Complex Microbiomes

open access: yesFrontiers in Bioengineering and Biotechnology, 2020
Microbial communities are pervasive in the natural environment, associated with many hosts, and of increasing importance in biotechnological applications.
Denny Popp, Florian Centler
doaj   +1 more source

Method for finding metabolic properties based on the general growth law. Liver examples. A General framework for biological modeling

open access: yes, 2014
We propose a method for finding metabolic parameters of cells, organs and whole organisms, which is based on the earlier discovered general growth law.
Shestopaloff, Yuri K.
core   +5 more sources

Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth

open access: yesmSystems, 2020
High proliferation rate and robustness are vital characteristics of bacterial pathogens that successfully colonize their hosts. The observation of drastically slow growth in some pathogens is thus paradoxical and remains unexplained.
Léo Gerlin   +6 more
doaj   +1 more source

Novel Drivers of Virulence in Clostridioides difficile Identified via Context-Specific Metabolic Network Analysis

open access: yesmSystems, 2021
The pathogen Clostridioides difficile causes toxin-mediated diarrhea and is the leading cause of hospital-acquired infection in the United States. Due to growing antibiotic resistance and recurrent infection, targeting C.
Matthew L. Jenior   +8 more
doaj   +1 more source

Metabolic interactions affect the biomass of synthetic bacterial biofilm communities

open access: yesmSystems, 2023
Microbes typically reside in communities containing multiple species, whose interactions have considerable impacts on the robustness and functionality of such communities. To manage microbial communities, it is essential to understand the factors driving
Xinli Sun   +10 more
doaj   +1 more source

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