Results 121 to 130 of about 1,283,302 (227)
Integrative Zoology, EarlyView.Multi‐omics analysis reveals that herbivorous adaptation in Lordiphosa flies arises from coordinated interactions across the genome, transcriptome, and gut microbiota: genomic expansions of detoxification (e.g., cytochrome P450s) and carbohydrate metabolism gene families, transcriptomic upregulation of energy pathways like lipid oxidation and ...
Run Guo +4 more
wiley +1 more source
Integrative Zoology, EarlyView.This study assessed the probiotic potential of intestinal microbiomes from five snake species using metagenomics and in vitro isolation, identifying two promising strains (Lactobacillus johnsonii DA0116 and Limosilactobacillus reuteri DA0218) through comprehensive screening.
Xuena Kang +11 more
wiley +1 more source
Integrative Zoology, EarlyView.A total of 435 non‐redundant metagenome‐assembled genomes (MAGs) were obtained from fecal samples of Taihangshan macaque across all four seasons. The alpha diversity of the gut microbiome in spring and winter was significantly higher than in summer and autumn. Furthermore, marked differences were detected in functional pathways and carbohydrate enzymes
Yanyan Zhou +6 more
wiley +1 more source
Assembling the Marine Metagenome, One Cell at a Time
PLoS ONE, 2009 The difficulty associated with the cultivation of most microorganisms and the complexity of natural microbial assemblages, such as marine plankton or human microbiome, hinder genome reconstruction of representative taxa using cultivation or metagenomic approaches.
Woyke, Tanja +13 more
openaire +4 more sources
Integrative Zoology, EarlyView.Metagenomic sequencing was used to analyze fecal microbiota of captive male forest musk deer (FMD) from the Sichuan Institute of Musk Deer Breeding across ages and musk‐secreting periods. Gut microbiota was generally stable and dominated by Firmicutes, while age and musk secretion shaped microbial composition and function, with musk collection linked ...
Jiuyan Jiang +17 more
wiley +1 more source
A phenotype‐based framework to measure functional redundancy in microbial ecosystems
Methods in Ecology and Evolution, EarlyView.Abstract Functional redundancy is a key biological concept that offers critical insights into microbial ecosystem stability and responses to environmental perturbations. Existing methods to quantify redundancy typically rely on gene annotations as functional units, limiting their ability to capture complex or partially characterised traits and making ...
Sofia Fraulini +4 more
wiley +1 more source
Wellcome Open ResearchWe present a genome assembly from an individual Anodontia alba (buttercup lucine; Mollusca; Bivalvia; Lucinida; Lucinidae). The genome sequence has a total length of 1 862.85 megabases.
Eerik Aunin +12 more
doaj +1 more source
metagenome-atlas/atlas: Functional annotation with eggNOG mapper V2
, 2019 ATLAS - Three commands to start analysing your metagenome ...
Silas Kieser +7 more
core +1 more source
MOCAT2: a metagenomic assembly, annotation and profiling framework
Bioinformatics, 2016 Abstract Summary: MOCAT2 is a software pipeline for metagenomic sequence assembly and gene prediction with novel features for taxonomic and functional abundance profiling. The automated generation and efficient annotation of non-redundant reference catalogs by propagating pre-computed assignments from 18 databases covering various ...
Jens Roat Kultima +9 more
openaire +4 more sources
The FEBS Journal, EarlyView.The microbial degradation of synthetic polyesters such as polyethylene terephthalate (PET) is mediated by diverse α/β‐hydrolases, many of which remain poorly characterized. In this study, we investigated the α/β‐hydrolase SM0281 from Sinorhizobium meliloti and found that it exhibits robust carboxylesterase and polyesterase activities toward PET, PCL ...
Sofia Lemak +7 more
wiley +1 more source