Results 121 to 130 of about 95,247 (306)

Microbial communities and key strains associated to banana spoilages through cultural plating and metagenomic analysis

Food Agricultural Sciences and Technology (FAST), 2023
This research investigated microbial communities associated to bananas spoilage by cultural plating and metagenomic analysis. Bananas were collected from three different sources including exported farm, domestic organic farm and marketed
Hoang Truc Anh To, Chayaporn Thanthithum, Cheunjit Prakitchaiwattana   +2 more
doaj  

SmashCommunity: A metagenomic annotation and analysis tool

, 2010
SUMMARY: SmashCommunity is a stand-alone metagenomic annotation and analysis pipeline suitable for data from Sanger and 454 sequencing technologies.
Foerstner, Konrad U, Bork, Peer, Raes, J., Manimozhiyan Arumugam, Foerstner, K.U., Eoghan D. Harrington, Harrington, E.D., Arumugam, M., Harrington, Eoghan D, Jeroen Raes, Arumugam, Manimozhiyan, Bork, P., Konrad U. Foerstner, Peer Bork, Raes, Jeroen   +14 more
core   +1 more source

Primary analysis of metagenomic data.

, 2018
The main purpose of this paper was to create a method that would allow to perform primary metagenomic data analysis. Because of the size and quantity of metagenomic data, primary metagenomic analysis can help researcher to identify goals, workflow and ...
Preidytė, Dovilė,
core  

Metagenomic Analysis of Contaminated Soils

, 2014
Several metagenomic techniques were applied to analyze the microbial communities found in contaminated sites. A high-throughput metagenomic method called substrate-induced gene expression (SIGEX) was used to screen for genes that were upregulated by ...
Meier, Matthew James
core   +1 more source

Distribution and diversity of bacterial secretion systems across metagenomic datasets [PDF]

, 2012
Bacteria can manipulate their surrounding environment through the secretion of proteins into other living organisms and into the extracellular milieu. In Gram stain negative bacteria this process is mediated by different types of secretion systems from ...
Egan, Frank, O’Gara, Fergal, Barret, Matthieu, O'Gara, Fergal   +3 more
core   +1 more source

Metagenomic study of food waste anaerobic digestion

Microbiology Spectrum
This study explores anaerobic digestion of food waste to understand the microbial community dynamics and metabolic pathways that drive the conversion of organic waste into biogas. Sampling was done at multiple time points during those 4 weeks (weekly) to
Oluwatomisin A. Akinsola, Samuel O. Dahunsi, Ebenezer L. Odekanle   +2 more
doaj   +1 more source

FoodMicrobiome transfert: Web based metagenomic analysis

, 2018
FoodMicrobiome transfert: Web based metagenomic analysis.
Loux, Valentin, Derozier, Sandra, Abraham, Anne-Laure, Guirimand, Thibaut, Renault, Pierre, Cavaillé, Quentin, Dridi, Bedis   +6 more
core   +1 more source

Bacillus aerius synergizes with coal gangue to enhance Medicago sativa growth via soil microbiome and gene regulation

Applied and Environmental Microbiology
The extensive accumulation of coal gangue poses significant environmental threats through water contamination, soil degradation, and atmospheric pollution, necessitating the urgent development of ecological utilization strategies.
Mingwu Liu, Meili Du, Zijie Xi, Kuanysh T. Tastambek, Yuan Bao, Xiaonan Song, Anning Zhou, Yaya Wang   +7 more
doaj   +1 more source

Heat Stress and Gut Microbiome Dynamics in Poultry: Interplay, Consequences, and Mitigation Strategies

Animal Research and One Health, EarlyView.
Heat stress disrupts gut microbial balance in poultry, impairing nutrient absorption and immunity. This review outlines the interplay between thermal stress and microbiome dynamics and discusses integrative mitigation strategies, probiotics, phytogenics, cooling systems, and genetic adaptation to enhance poultry resilience.
O. E. Oke, A. I. Oni, O. A. Akosile, K. M. Oliyide, C. A. Ishola, M. O. Logunleko, O. A. Jimoh, C. P. Njoku, L. O. Fasasi, V. A. Uyanga   +9 more
wiley   +1 more source

Metagenomic Analysis of Wild Apple (Malus sieversii) Trees from Natural Habitats of Kazakhstan

Plants
Kazakhstan’s rich biodiversity includes diverse apple populations, notably the wild apple tree (Malus sieversii) prized for traits like disease resistance and adaptability, potentially aiding breeding programs. Analyzing their microbiomes offers insights
Aruzhan Mendybayeva, Alibek Makhambetov, Kirill Yanin, Aisha Taskuzhina, Marina Khusnitdinova, Dilyara Gritsenko   +5 more
doaj   +1 more source