Results 81 to 90 of about 117,934 (343)
BMC Pregnancy and Childbirth, 2020 Background An aberrant composition of the salivary microbiota has been found in individuals with type 2 diabetes, and in pregnant women salivary microbiota composition has been associated with preeclampsia and pre-term birth.
Mie K. W. Crusell +8 more
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Microbial Cell Factories, 2022 Background The genus Planococcus is comprised of halophilic bacteria generally reported for the production of carotenoid pigments and biosurfactants. In previous work, we showed that the culturing of the orange-pigmented Planococcus sp.
Anesu Conrad Moyo +4 more
doaj +1 more source
Viruses, 2023 Virome research is a rapidly growing area in the microbiome field that is increasingly associated with human diseases, such as inflammatory bowel disease (IBD).
Daan Jansen, Jelle Matthijnssens
doaj +1 more source
KrakenUniq: confident and fast metagenomics classification using unique k-mer counts
Genome Biology, 2018 False-positive identifications are a significant problem in metagenomics classification. We present KrakenUniq, a novel metagenomics classifier that combines the fast k-mer-based classification of Kraken with an efficient algorithm for assessing the ...
F. Breitwieser +2 more
semanticscholar +1 more source
Metagenomics for taxonomy profiling: tools and approaches
Bioengineered, 2020 Statement of Retraction We have retracted the following article: Mukesh Kumar Awasthi, B. Ravindran, Surendra Sarsaiya, Hongyu Chen, Steven Wainaina, Ekta Singh, Tao Liu, Sunil Kumar, Ashok Pandey, Lal Singh & Zengqiang Zhang, “Metagenomics for taxonomy ...
Mukesh Kumar Awasthi +10 more
semanticscholar +1 more source
A Bioinformatician's Guide to Metagenomics [PDF]
Microbiology and Molecular Biology Reviews, 2008 SUMMARYAs random shotgun metagenomic projects proliferate and become the dominant source of publicly available sequence data, procedures for the best practices in their execution and analysis become increasingly important. Based on our experience at the Joint Genome Institute, we describe the chain of decisions accompanying a metagenomic project from ...
Kunin, V. +4 more
openaire +4 more sources
Advanced Science, EarlyView.Circardian rhythm disorder (CRD) causes abnormal expression of intestinal Period 2 (Per2) gene, which compromising intestinal barrier integrity and altering the gut microenvironment. Microbiota dysbiosis and aberrant metabolites production drive central inflammation, impair neurogenesis, and promote functional deficits, ultimately facilitating the ...
Huiliang Zhang +16 more
wiley +1 more source
Consensus statement: Virus taxonomy in the age of metagenomics
Nature Reviews Microbiology, 2017 The number and diversity of viral sequences that are identified in metagenomic data far exceeds that of experimentally characterized virus isolates. In a recent workshop, a panel of experts discussed the proposal that, with appropriate quality control ...
P. Simmonds +25 more
semanticscholar +1 more source
Advanced Science, EarlyView.Here, our novel model that integrates metabolism with motility dynamics reveals that microalgae shift bacterial movement toward Lévy flight patterns, enhancing encounter rates and self‐aggregation. This microecological manipulation reduces energy costs, strengthens functions such as pollutant removal and system stability.
Luyu Zhang +7 more
wiley +1 more source
Temporal disturbance of a model stream ecosystem by high microbial diversity from treated wastewater
MicrobiologyOpen, 2023 Microbial communities in freshwater streams play an essential role in ecosystem functioning via biogeochemical cycling. Yet, the impacts of treated wastewater influx into stream ecosystems on microbial strain diversity remain mostly unexplored.
Tom L. Stach +11 more
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