Results 101 to 110 of about 5,355 (193)

Data-Independent Acquisition Mass Spectrometry in Metaproteomics of Gut MicrobiotaImplementation and Computational Analysis

open access: yes, 2019
Metagenomic approaches focus on taxonomy or gene annotation but lack power in defining functionality of gut microbiota. Therefore, metaproteomics approaches have been introduced to overcome this limitation.
Juhani Aakko   +17 more
core   +1 more source

The Metaproteomics Initiative: an international community by and for metaproteomics researchers

open access: yes
Poster presented at European Proteomics Association 2025, Saint-Malo ...
openaire   +1 more source

Exploring mixed microbial community functioning: recent advances in metaproteomics

open access: yes, 2012
System approaches to elucidate ecosystem functioning constitute an emerging area of research within microbial ecology. Such approaches aim at investigating all levels of biological information (DNA, RNA, proteins and metabolites) to capture the ...
Abram, Florence   +2 more
core   +1 more source

Biodiversity analysis of metaproteomics samples with Unipept : a comprehensive tutorial

open access: yes
Metaproteomics has become a crucial omics technology for studying microbiomes. In this area, the Unipept ecosystem, accessible at https://unipept.ugent.be, has emerged as a valuable resource for analyzing metaproteomic data.
Verschaffelt, Pieter   +5 more
core   +1 more source

Sipros Ensemble improves database searching and filtering for complex metaproteomics

open access: yes, 2017
Motivation Complex microbial communities can be characterized by metagenomics and metaproteomics. However, metagenome assemblies often generate enormous, and yet incomplete, protein databases, which undermines the identification of ...
Zhou Li   +7 more
core   +1 more source

Spectral entropy as a measure of the metaproteome complexity

open access: yesPROTEOMICS
AbstractThe diversity and complexity of the microbiome's genomic landscape are not always mirrored in its proteomic profile. Despite the anticipated proteomic diversity, observed complexities of microbiome samples are often lower than expected. Two main factors contribute to this discrepancy: limitations in mass spectrometry's detection sensitivity and
Haonan Duan   +3 more
openaire   +3 more sources

Multi-Metaomics Unveils the Development Process of Microbial Communities During the Fermentation of Baobaoqu

open access: yesFoods
In order to understand the dynamic interaction process among species, enzymes, and metabolites during the fermentation process of Baobaoqu, which is a representative Daqu starter for Chinese baijiu, the intimate connection between the progression of ...
Qingchun Luo   +15 more
doaj   +1 more source

Isobaric Labeling Quantitative Metaproteomics for the Study of Gut Microbiome Response to Arsenic

open access: yes, 2019
Quantitative metaproteomics is a relatively new research field that applies proteomics techniques to study microbial proteins of the microbiome and holds great potential in truly quantifying the functional proteins actually expressed by microbes in the ...
Jingchuan Xue (1395574)   +11 more
core   +1 more source

Exploring mixed microbial community functioning: recent advances in metaproteomics

open access: yes, 2018
System approaches to elucidate ecosystem functioning constitute an emerging area of research within microbial ecology. Such approaches aim at investigating all levels of biological information (DNA, RNA, proteins and metabolites) to capture the ...
Abram, Florence   +2 more
core  

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