Results 41 to 50 of about 5,355 (193)

MetaGOmics: A Web-Based Tool for Peptide-Centric Functional and Taxonomic Analysis of Metaproteomics Data

open access: yesProteomes, 2017
Metaproteomics is the characterization of all proteins being expressed by a community of organisms in a complex biological sample at a single point in time. Applications of metaproteomics range from the comparative analysis of environmental samples (such
Michael Riffle   +6 more
doaj   +1 more source

An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome

open access: yesGut Microbes, 2021
Intestinal microbiota plays a key role in shaping host homeostasis by regulating metabolism, immune responses and behavior. Its dysregulation has been associated with metabolic, immune and neuropsychiatric disorders and is accompanied by changes in ...
Nicolas Nalpas   +10 more
doaj   +1 more source

Fecal Metaproteomics Reveals Reduced Gut Inflammation and Changed Microbial Metabolism Following Lifestyle-Induced Weight Loss

open access: yesBiomolecules, 2021
Gut microbiota-mediated inflammation promotes obesity-associated low-grade inflammation, which represents a hallmark of metabolic syndrome. To investigate if lifestyle-induced weight loss (WL) may modulate the gut microbiome composition and its ...
Ronald Biemann   +10 more
doaj   +1 more source

Microbiota-directed biotherapeutics: considerations for quality and functional assessment

open access: yesGut Microbes, 2023
Mounting evidence points to causative or correlative roles of gut microbiome in the development of a myriad of diseases ranging from gastrointestinal diseases, metabolic diseases to neurological disorders and cancers. Consequently, efforts have been made
Emily Ef Fekete, Daniel Figeys, Xu Zhang
doaj   +1 more source

Human gut microbiome and metabolite dynamics under simulated microgravity

open access: yesGut Microbes, 2023
The Artificial Gravity Bed Rest – European Space Agency (AGBRESA) study was the first joint bed rest study by ESA, DLR, and NASA that examined the effect of simulated weightlessness on the human body and assessed the potential benefits of artificial ...
Ana Ramos-Nascimento   +17 more
doaj   +1 more source

Who is out there? What are they doing? Application of metagenomics and metaproteomics to reveal soil functioning

open access: yesItalian Journal of Mycology, 2017
In order to link microbial community composition to ecological processes happening in the brûlé, a metaproteomics analysis was applied to a brûlé previously characterized by metagenomics.
Antonietta Mello, Elisa Zampieri
doaj   +1 more source

Metaproteomics tutorial (training data)

open access: yes, 2017
<p><strong>Metaproteomics</strong> uses MS/MS data and matches it to peptide sequences.</p> <p>In the training available at https://galaxyproject.github.io/training-material//topics/proteomics/tutorials/metaproteomics ...
Blank, Clemens   +7 more
core   +1 more source

Metaproteomics reveals functional partitioning and vegetational variation among permafrost-affected Arctic soil bacterial communities

open access: yesmSystems, 2023
Microbial activity in Arctic soils controls the cycling of significant stores of organic carbon and nutrients. We studied in situ processes in Alaskan soils using original metaproteomic methods in order to relate important heterotrophic functions to ...
Samuel E. Miller   +2 more
doaj   +1 more source

Reprint of “Which metaproteome? The impact of protein extraction bias on metaproteomic analyses”

open access: yesMolecular and Cellular Probes, 2014
Culture-independent techniques such as LC-MS/MS-based metaproteomic analyses are being increasingly utilized for the study of microbial composition and function in complex environmental samples. Although several studies have documented the many challenges and sources of bias that must be considered in these types of analyses, none have systematically ...
Dagmar Hajkova, Leary   +4 more
openaire   +2 more sources

Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities

open access: yesmSystems, 2019
Metaproteomics is the large-scale identification and quantification of proteins from microbial communities and thus provides direct insight into the phenotypes of microorganisms on the molecular level.
Manuel Kleiner
doaj   +1 more source

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