Results 71 to 80 of about 1,783 (178)
, 2013 In this study, we demonstrate the possibility of obtaining a targeted metatranscriptome from a functional group of microorganisms using a stable isotope probing (SIP) approach. Methanotrophs in lake sediment were labelled using (13)CH4, and both labelled
Casper, Peter +5 more
core +1 more source
Problems With GO Enrichment as an Endpoint for Ecological Omics Interpretation
Molecular Ecology, Volume 35, Issue 19, October 2026.ABSTRACT Gene Ontology (GO) enrichment analysis has been widely adopted for interpretating omics data, including in ecological research. Although valuable for summarizing large gene lists into functional categories, it is often treated as the final interpretive step.
Ehsan Pashay Ahi +2 more
wiley +1 more source
, 2018 The top ten enriched functional categories from the metatranscriptome obtained from the RefSeq microbial genomes database.
Heebal Kim (9991) +8 more
core +1 more source
New Phytologist, Volume 252, Issue 1, Page 400-413, October 2026.Share of transcripts and ITS2 sequence for each gene families among identified fungal contigs and OTUs. Summary Boreal forest ecosystems constitute a large terrestrial reservoir of carbon. In these nitrogen‐limited environments, release of nutrients through decomposition of soil organic matter is of fundamental importance.
Florian Barbi +4 more
wiley +1 more source
Metatranscriptomic Analysis of Arctic Peat Soil Microbiota [PDF]
Applied and Environmental Microbiology, 2014 ABSTRACT Recent advances in meta-omics and particularly metatranscriptomic approaches have enabled detailed studies of the structure and function of microbial communities in many ecosystems. Molecular analyses of peat soils, ecosystems important to the global carbon balance, are still challenging due to the presence of ...
Tveit, Alexander Tøsdal +2 more
openaire +4 more sources
PlantsMosses host diverse bacterial communities essential for their fitness, nutrient acquisition, stress tolerance, and pathogen defense. Understanding the microbiome’s taxonomic composition is the first step, but unraveling their functional capabilities is ...
Vesselin Baev +4 more
doaj +1 more source
Development of computational methods for the analysis of metagenome and metatranscriptome data [PDF]
, 2012 Zakrzewski M. Development of computational methods for the analysis of metagenome and metatranscriptome data.
Zakrzewski, Martha
core
, 2016 Metatranscriptome sequencing results for the bacterial metagenome in the sputum of moderate and severe COPD subjects.
Shih-Wei Lee (382046) +3 more
core +1 more source
Advanced Science, Volume 13, Issue 50, 7 September 2026.A three‐tier livestock multi‐omics framework resolves four typical analytical pitfalls. Moving from statistical association through machine learning preprocessing to triple‐modal causal inference, it converts omics results into genomic selection and gene editing strategies to achieve One Health, underpinned by multi‐omics data, multimodal sequencing ...
Jiying Wen +5 more
wiley +1 more source
Frontiers in Cellular and Infection Microbiology, 2023 Suillus luteus is a widespread edible ectomycorrhizal fungus that holds significant importance in both ecological and economic value. Mycoviruses are ubiquitous infectious agents hosted in different fungi, with some known to exert beneficial or ...
Hanzhao Liu +7 more
doaj +1 more source