Results 71 to 80 of about 18,529 (279)

Metatranscriptomics-guided genome-scale metabolic reconstruction reveals the carbon flux and trophic interaction in methanogenic communities

open access: yesMicrobiome
Background Despite rapid advances in genomic-resolved metagenomics and remarkable explosion of metagenome-assembled genomes (MAGs), the function of uncultivated anaerobic lineages and their interactions in carbon mineralization remain largely uncertain ...
Weifu Yan   +10 more
semanticscholar   +1 more source

Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics

open access: yesThe ISME Journal, 2020
Short-chain fatty acid (SCFA) degradation is an important process in methanogenic ecosystems, and is usually catalyzed by SCFA-oxidizing bacteria in syntrophy with methanogens.
Liping Hao   +7 more
semanticscholar   +1 more source

Metatranscriptomics Reveals the Diversity of the Tick Virome in Northwest China

open access: yesMicrobiology spectrum, 2022
Ticks are widely distributed in pastoral areas in northwestern China and act as vectors that carry and transmit a variety of pathogens, especially viruses.
Yunyi Kong   +6 more
semanticscholar   +1 more source

Linking Genes to Microbial Biogeochemical Cycling Lessons from Arsenic [PDF]

open access: yes, 2017
The biotransformation of arsenic is highly relevant to the arsenic biogeochemical cycle. Identification of the molecular details of microbial pathways of arsenic biotransformation coupled with analyses of microbial communities by meta -omits can provide ...
Kappler, Andreas   +4 more
core   +1 more source

Over two decades of research on the marine RNA virosphere

open access: yesiMeta, 2022
RNA viruses (realm: Riboviria), including RNA phages and eukaryote‐infecting RNA viruses, are essential components of marine ecosystems. A large number of marine RNA viruses have been discovered in the last two decades because of the rapid development of
Meng‐en Liao   +3 more
doaj   +1 more source

Characterization of Bacterial Community Dynamics of the Human Mouth Throughout Decomposition via Metagenomic, Metatranscriptomic, and Culturing Techniques

open access: yesFrontiers in Microbiology, 2021
The postmortem microbiome has recently moved to the forefront of forensic research, and many studies have focused on the idea that predictable fluctuations in decomposer communities could be used as a “microbial clock” to determine time of death ...
Emily C. Ashe   +3 more
doaj   +1 more source

Metatranscriptomics captures dynamic shifts in mycorrhizal coordination in boreal forests

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2022
Significance Advances in DNA sequencing have provided an unprecedented view of the complex microbial communities that populate global ecosystems. We present a metatranscriptomic analysis of samples from the boreal forest—the largest terrestrial carbon ...
Simon R. Law   +10 more
semanticscholar   +1 more source

Relating the metatranscriptome and metagenome of the human gut [PDF]

open access: yes, 2014
Although the composition of the human microbiome is now wellstudied, the microbiota’s \u3e8 million genes and their regulation remain largely uncharacterized.
Boylan, Matthew R.   +13 more
core   +2 more sources

The occurrence of banana Fusarium wilt aggravates antibiotic resistance genes dissemination in soil

open access: yesEcotoxicology and Environmental Safety
The spread of antibiotic resistance genes (ARGs) and subsequent soil-borne disease outbreaks are major threats to soil health and sustainable crop production.
Jiabao Wang   +7 more
doaj   +1 more source

Functional Characteristics of the Flying Squirrel's Cecal Microbiota under a Leaf-Based Diet, Based on Multiple Meta-Omic Profiling

open access: yesFrontiers in Microbiology, 2018
Mammalian herbivores rely on microbial activities in an expanded gut chamber to convert plant biomass into absorbable nutrients. Distinct from ruminants, small herbivores typically have a simple stomach but an enlarged cecum to harbor symbiotic microbes;
Hsiao-Pei Lu   +14 more
doaj   +1 more source

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