Results 61 to 70 of about 14,226 (247)
Frontiers in Microbiology, 2021 The postmortem microbiome has recently moved to the forefront of forensic research, and many studies have focused on the idea that predictable fluctuations in decomposer communities could be used as a “microbial clock” to determine time of death ...
Emily C. Ashe +3 more
doaj +1 more source
Metabolic network analysis reveals microbial community interactions in anammox granules. [PDF]
, 2017 Microbial communities mediating anaerobic ammonium oxidation (anammox) represent one of the most energy-efficient environmental biotechnologies for nitrogen removal from wastewater.
Bhattacharjee, Ananda S +6 more
core +2 more sources
The occurrence of banana Fusarium wilt aggravates antibiotic resistance genes dissemination in soil
Ecotoxicology and Environmental SafetyThe spread of antibiotic resistance genes (ARGs) and subsequent soil-borne disease outbreaks are major threats to soil health and sustainable crop production.
Jiabao Wang +7 more
doaj +1 more source
Frontiers in Microbiology, 2018 Mammalian herbivores rely on microbial activities in an expanded gut chamber to convert plant biomass into absorbable nutrients. Distinct from ruminants, small herbivores typically have a simple stomach but an enlarged cecum to harbor symbiotic microbes;
Hsiao-Pei Lu +14 more
doaj +1 more source
Microorganisms, 2020 Obesity is a multifactorial disorder, and the gut microbiome has been suggested to contribute to its onset. In order to better clarify the role of the microbiome in obesity, we evaluated the metatranscriptome in duodenal biopsies from a cohort of 23 ...
Ilaria Granata +8 more
doaj +1 more source
The Human Microbiome and Recurrent Abdominal Pain in Children [PDF]
, 2010 This project explores the nature of the human intestinal microbiome in healthy children and children with recurrent abdominal pain. The overall goal is to obtain a robust knowledge base of the intestinal microbiome in children without evidence of pain or
Debasmita Mandal +12 more
core +3 more sources
SAMSA: a comprehensive metatranscriptome analysis pipeline
BMC Bioinformatics, 2016 Abstract Background Although metatranscriptomics—the study of diverse microbial population activity based on RNA-seq data—is rapidly growing in popularity, there are limited options for biologists to analyze this type of data.
Samuel T. Westreich +3 more
openaire +4 more sources
Advanced Science, EarlyView.A real‐world model of structured animal product restriction practiced for religious reasons reveals the dynamic adaptability of the human gut microbiome to dietary change and uncovers reductions in diversity and rare taxa loss. Integrated microbiome, metabolomic, and proteomic analyses uncover coordinated taxonomic and molecular shifts and identify ...
Christina Emmanouil +7 more
wiley +1 more source
Directed Culturing of Microorganisms Using Metatranscriptomics [PDF]
mBio, 2011 ABSTRACT The vast majority of bacterial species remain uncultured, and this severely limits the investigation of their physiology, metabolic capabilities, and role in the environment. High-throughput sequencing of RNA transcripts (RNA-seq) allows the investigation of the diverse physiologies from uncultured ...
Lindsey Bomar +3 more
openaire +3 more sources
Advanced Science, EarlyView.Using field‐based holo‐omics, we demonstrate that developmental shifts in sorghum leaf metabolomes drive a noncanonical fungal succession from stress tolerators (S) through ruderals (R) to competitors (C). Antifungal metabolites in young leaves select for S strategists with expanded genomes, transient maltose pulses during flowering favor fast‐growing ...
Peilin Chen, John W. Taylor, Cheng Gao
wiley +1 more source