Results 41 to 50 of about 9,285 (257)
Transcriptional Shifts Highlight the Role of Nutrients in Harmful Brown Tide Dynamics
Frontiers in Microbiology, 2019 Harmful algal blooms (HABs) threaten ecosystems and human health worldwide. Controlling nitrogen inputs to coastal waters is a common HAB management strategy, as nutrient concentrations often suggest coastal blooms are nitrogen-limited. However, defining
Louie L. Wurch +5 more
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Structured RNA Contaminants in Bacterial Ribo-Seq
mSphere, 2020 Ribosome profiling (Ribo-Seq) is a powerful method to study translation in bacteria. However, Ribo-Seq signal can be observed across RNAs that one would not expect to be bound by ribosomes.
Brayon J. Fremin, Ami S. Bhatt
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Metatranscriptome of the Oral Microbiome in Health and Disease [PDF]
Journal of Dental Research, 2018 The last few decades have witnessed an increasing interest in studying the human microbiome and its role in health and disease. The focus of those studies was mainly the characterization of changes in the composition of the microbial communities under different conditions.
J. Solbiati, J. Frias-Lopez
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Relating the metatranscriptome and metagenome of the human gut [PDF]
Proceedings of the National Academy of Sciences, 2014 SignificanceRecent years have seen incredible growth in both the scale and specificity of projects analyzing the microbial organisms living in and on the human body (the human microbiome). Such studies typically require subjects to report to clinics for sample collection, a complicated practice that is impractical for large studies.
E. A. Franzosa +13 more
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Frontiers in Microbiology, 2018 While most studies using RNA-stable isotope probing (SIP) to date have focused on ribosomal RNA, the detection of 13C-labeled mRNA has rarely been demonstrated.
Lauren M. Bradford +6 more
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Environmental DNA, 2023 Temperate coastal marine waters are often thermally stratified from spring through fall but can be dynamic and disrupted by tidal currents and wind‐driven upwelling. These mixing events introduce deeper, cooler water with a higher partial pressure of CO2
Ben J. G. Sutherland +8 more
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Current Knowledge and Computational Techniques for Grapevine Meta-Omics Analysis
Frontiers in Plant Science, 2018 Growing grapevine (Vitis vinifera) is a key contribution to the economy of many countries. Tools provided by genomics and bioinformatics did help researchers in obtaining biological knowledge about the different cultivars.
Salvatore Alaimo +4 more
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Metatranscriptomic exploration of microbial functioning in clouds [PDF]
Scientific Reports, 2019 AbstractClouds constitute the uppermost layer of the biosphere. They host diverse communities whose functioning remains obscure, although biological activity potentially participates to atmospheric chemical and physical processes. In order to gain information on the metabolic functioning of microbial communities in clouds, we conducted coordinated ...
Amato, Pierre +5 more
openaire +3 more sources
Stool metatranscriptomics: A technical guideline for mRNA stabilisation and isolation [PDF]
, 2015 The complex microbiome of the gut has an enormous impact on human health. Analysis of the transcriptional activity of microorganisms through mRNA sequencing (metatranscriptomics) opens a completely new window into their activity in vivo, but it is highly
Deng, Zhiluo +12 more
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Spatial metatranscriptomics resolves host-bacteria-fungi interactomes, Source Data
, 2023 Source Data for a publication: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes. Includes the data sets to generate the results.
Carlos, Vanessa +6 more
core +2 more sources