Results 31 to 40 of about 14,226 (247)
mSystems, 2021 The health, growth, and fitness of boreal forest trees are impacted and improved by their associated microbiomes. Microbial gene expression and functional activity can be assayed with RNA sequencing (RNA-Seq) data from host samples.
Andreas N. Schneider +7 more
doaj +1 more source
Augmenting Biogas Process Modeling by Resolving Intracellular Metabolic Activity [PDF]
, 2019 The process of anaerobic digestion in which waste biomass is transformed to methane by complex microbial communities has been modeled for more than 16 years by parametric gray box approaches that simplify process biology and do not resolve intracellular ...
Denny Popp +7 more
core +1 more source
Metatranscriptomic analyses of honey bee colonies [PDF]
Frontiers in Genetics, 2015 Honey bees face numerous biotic threats from viruses to bacteria, fungi, protists, and mites. Here we describe a thorough analysis of microbes harbored by worker honey bees collected from field colonies in geographically distinct regions of Turkey. Turkey is one of the World's most important centers of apiculture, harboring five subspecies of Apis ...
Tozkar, Cansu Özge +4 more
openaire +4 more sources
Frontiers in Plant Science, 2016 Current and emerging plant diseases caused by obligate parasitic microbes such as rusts, downy mildews, and powdery mildews threaten worldwide crop production and food safety.
Li Guo +9 more
doaj +1 more source
Metatranscriptomic census of active protists in soils [PDF]
The ISME Journal, 2015 Abstract The high numbers and diversity of protists in soil systems have long been presumed, but their true diversity and community composition have remained largely concealed. Traditional cultivation-based methods miss a majority of taxa, whereas molecular barcoding approaches employing PCR introduce significant biases in reported ...
Geisen, S. +6 more
openaire +4 more sources
The Viral Fraction Metatranscriptomes of Lake Baikal
Microorganisms, 2022 This article characterises viral fraction metatranscriptomes (smaller than 0.2 µm) from the pelagic zone of oligotrophic Lake Baikal (Russia). The study revealed the dominance of transcripts of DNA viruses: bacteriophages and algal viruses. We identified transcripts similar to Pithovirus sibericum, a nucleocytoplasmic large DNA virus (NCLDV) isolated ...
Sergey Potapov +5 more
openaire +3 more sources
Frontiers in Microbiology, 2016 Emerging infectious diseases in wildlife are responsible for massive population declines. In amphibians, chytridiomycosis caused by Batrachochytrium dendrobatidis, Bd, has severely affected many amphibian populations and species around the world.
Eria Alaide Rebollar +19 more
doaj +1 more source
Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition. [PDF]
, 2019 Mortierella and Ilyonectria genera include common species of soil fungi that are frequently detected as root endophytes in many plants, including Populus spp.
Bonito, Gregory +10 more
core +2 more sources
Exploring the tymovirids landscape through metatranscriptomics data [PDF]
Archives of Virology, 2021 Abstract Tymovirales is an order of viruses with positive-sense, single-stranded RNA genomes that mostly infect plants, but also fungi and insects. The number of tymovirid sequences has been growing in the last few years with the extensive use of high-throughput sequencing platforms.
Nicolás Bejerman, Humberto Debat
openaire +2 more sources
Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community
mSystems, 2020 Regulatory small RNAs (sRNAs) play large-scale and essential roles in many cellular processes across all domains of life. Microbial sRNAs have been extensively studied in model organisms, but very little is known about the dynamics of sRNA synthesis and ...
Diego R. Gelsinger +5 more
doaj +1 more source