Results 81 to 90 of about 18,529 (279)

Duodenal Metatranscriptomics to Define Human and Microbial Functional Alterations Associated with Severe Obesity: A Pilot Study

Microorganisms, 2020
Obesity is a multifactorial disorder, and the gut microbiome has been suggested to contribute to its onset. In order to better clarify the role of the microbiome in obesity, we evaluated the metatranscriptome in duodenal biopsies from a cohort of 23 ...
Ilaria Granata, Carmela Nardelli, Valeria D’Argenio, Salvatore Tramontano, Debora Compare, Mario Rosario Guarracino, Gerardo Nardone, Vincenzo Pilone, Lucia Sacchetti   +8 more
doaj   +1 more source

Metatranscriptomics Unravel Composition, Drivers, and Functions of the Active Microorganisms in Light-Flavor Liquor Fermentation

Microbiology spectrum, 2022
There is an urgent need for discovering the diversity and functions of the active microbial community in solid-state fermentation, especially in the pit of Chinese distilled liquor fermentation. Although the genetic composition of the microbial community
Yuanyuan Pan, Ying Wang, Wen-bo Hao, C. Duan, Shiyuan Wang, Jinwang Wei, Gang Liu   +6 more
semanticscholar   +1 more source

The effects of arbuscular mycorrhizal fungi (AMF) and Rhizophagus irregularis on soil microorganisms assessed by metatranscriptomics and metaproteomics

, 2019
Arbuscular mycorrhizal fungi (AMF) form symbioses with approximately 80% of plant species and potentially benefit their hosts (e.g. nutrient acquisition) and the soil environment (e.g. soil aggregation).
Johnston, P., Lammel, D., Mbedi, S., Meierhofer, D., Rillig, M.   +4 more
core   +1 more source

Back to the future of soil metagenomics [PDF]

, 2016
JN was funded by a fellowship from the French MENESR.Peer reviewedPeer ...
Alexander eSczyrba, Alfred ePühler, Angela eSessitsch, Antonio eLagares, Antonio eLagares, Asa eFrostegard, Christa eSchleper, Christoph C. Tebbe, Colin eMurrell, David D. Myrold, Denis eLe Paslier, Dominique eBrunel, Ed eTopp, Edouard eJurkevitch, Fergal eO'Gara, Fergal eO'Gara, Franco eWidmer, Geertje eVan Keulen, George A. Kowalchuk, George eTsiamis, Hilary M. Lapin-Scott, Ines eMandic-Mulec, Jan Dirk eVan Elsas, Jan eSørensen, Janet K. Jansson, John Jacob eParnell, Joseph eNesme, Joseph eNesme, Josh David Neufeld, Juan Luis eRamos, Kristiina Leena Kruus, Liping eZhao, Luiz eRoesch, Mark eBailey, Michael eSchloter, Michael eWagner, Paolo eNannipieri, Pascal eSimonet, Petr eBaldrian, Renaud eNalin, Sara eSjöling, Spiros eAgathos, Søren J Sørensen, Thierry eHeulin, Timothy M. Vogel, Tong eZhang, Victor ePylro, Wafa eAchouak, Xiaojun eZhang, Yong-Guan eZhu   +49 more
core   +11 more sources

Metatranscriptomic Analysis of the Chicken Gut Resistome Response to In-Feed Antibiotics and Natural Feed Additives

Frontiers in Microbiology, 2022
The emergence of resistance against common antibiotics in the gut microbiota is a major issue for both human and livestock health. This highlights the need for understanding the impact of such application on the reservoir of antibiotic resistance genes ...
Raju Koorakula, Raju Koorakula, Matteo Schiavinato, Mahdi Ghanbari, Gertrude Wegl, Nikolaus Grabner, Andreas Koestelbauer, Viviana Klose, Juliane C. Dohm, Konrad J. Domig   +9 more
doaj   +1 more source

Metatranscriptomic Investigation of Adaptation in NO and N2O Production From a Lab-Scale Nitrification Process Upon Repeated Exposure to Anoxic–Aerobic Cycling

Frontiers in Microbiology, 2018
The molecular mechanisms of microbial adaptation to repeated anoxic–aerobic cycling were investigated by integrating whole community gene expression (metatranscriptomics) and physiological responses, including the production of nitric (NO) and nitrous ...
Ariane Coelho Brotto, Medini K Annavajhala, Kartik Chandran   +2 more
doaj   +1 more source

Metatranscriptomics reveals a shift in microbial community composition and function during summer months in a coastal marine environment

bioRxiv, 2022
Temperate coastal marine waters are often thermally stratified from spring through fall but can be dynamic and disrupted by tidal currents and wind-driven upwelling. These mixing events introduce deeper, cooler water with a higher partial pressure of CO2
B. G. Sutherland, Jan F. Finke, R. Saunders, Snehal Warne, A. Schulze, Jeff H T Strohm, A. M. Chan, C. Suttle, K. Miller   +8 more
semanticscholar   +1 more source

The link between the ecology of the prokaryotic rare biosphere and its biotechnological potential [PDF]

, 2020
Current research on the prokaryotic low abundance taxa, the prokaryotic rare biosphere, is growing, leading to a greater understanding of the mechanisms underlying organismal rarity and its relevance in ecology.
Costa, Rodrigo, Magalhães, Catarina, Pascoal, Francisco   +2 more
core   +1 more source

Metatranscriptome profiling of a harmful algal bloom [PDF]

Harmful Algae, 2014
Metagenomic methods provide a powerful means to investigate complex ecological phenomena. Developed originally for study of Bacteria and Archaea, the application of these methods to eukaryotic microorganisms is yet to be fully realized. Most prior environmental molecular studies of eukaryotes have relied heavily on PCR amplification with eukaryote ...
Endymion D, Cooper, Bastian, Bentlage, Theodore R, Gibbons, Tsvetan R, Bachvaroff, Charles F, Delwiche   +4 more
openaire   +2 more sources

Novel Mycoviruses Discovered from a Metatranscriptomics Survey of the Phytopathogenic Alternaria Fungus

Viruses, 2022
Alternaria fungus can cause notable diseases in cereals, ornamental plants, vegetables, and fruits around the world. To date, an increasing number of mycoviruses have been accurately and successfully identified in this fungus.
Wenqing Wang, Xianhong Wang, C. Tu, Mengmeng Yang, J. Xiang, Liping Wang, N. Hong, L. Zhai, Guoping Wang   +8 more
semanticscholar   +1 more source