Results 51 to 60 of about 1,074 (164)

Comparative Genomics of Candidatus Methylomirabilis Species and Description of Ca. Methylomirabilis Lanthanidiphila

Frontiers in Microbiology, 2018
Methane is a potent greenhouse gas, which can be converted by microorganism at the expense of oxygen, nitrate, nitrite, metal-oxides or sulfate. The bacterium ‘Candidatus Methylomirabilis oxyfera,’ a member of the NC10 phylum, is capable of nitrite ...
Wouter Versantvoort, Simon Guerrero-Cruz, Daan R. Speth, Jeroen Frank, Jeroen Frank, Lavinia Gambelli, Geert Cremers, Theo van Alen, Mike S. M. Jetten, Mike S. M. Jetten, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp, Joachim Reimann   +13 more
doaj   +1 more source

Clumped isotopes as fingerprints of microbial methane production pathways in marine sediments

Limnology and Oceanography Letters, Volume 11, Issue 1, January 2026.
Abstract Microbial methanogenesis in marine sediments produces significant amounts of methane from various substrates; however, identifying the active pathways in situ remains challenging. While the bulk and clumped isotopic signatures of methane from different pathways have been studied in pure cultures, these are difficult to compare with complex ...
Anna J. Wallenius, Malavika Sivan, Maria E. Popa, Caroline P. Slomp, Thomas Röckmann, Mike S.M. Jetten   +5 more
wiley   +1 more source

Protein Target Highlights in CASP16: Insights From the Structure Providers

Proteins: Structure, Function, and Bioinformatics, Volume 94, Issue 1, Page 25-50, January 2026.
ABSTRACT This article presents an in‐depth analysis of selected CASP16 targets, with a focus on their biological and functional significance. The authors highlight the most relevant features of the target proteins and discuss how well these were reproduced in the submitted predictions.
Leila T. Alexander, Océane M. Follonier, Andriy Kryshtafovych, Kim Abesamis, Sabrina Bibi‐Triki, Henry G. Box, Cécile Breyton, Françoise Bringel, Loic Carrique, Alessio d'Acapito, Gang Dong, Rebecca DuBois, Deborah Fass, Juliana Martinez Fiesco, Daniel R. Fox, Jonathan M. Grimes, Rhys Grinter, Matthew Jenkins, Roman Kamyshinsky, Jeremy R. Keown, Gerald Lackner, Michael Lammers, Shiheng Liu, Andrew L. Lovering, Tomas Malinauskas, Benoît Masquida, Gottfried J. Palm, Christian Siebold, Tiantian Su, Ping Zhang, Z. Hong Zhou, Krzysztof Fidelis, Maya Topf, John Moult, Torsten Schwede   +34 more
wiley   +1 more source

Methylotrophic Autotrophy in Beijerinckia mobilis [PDF]

Journal of Bacteriology, 2005
ABSTRACT Representatives of the genus Beijerinckia are known as heterotrophic, dinitrogen-fixing bacteria which utilize a wide range of multicarbon compounds. Here we show that at least one of the currently known species of this genus, i.e., Beijerinckia ...
Dedysh, S., Smirnova, K., Khmelenina, V., Suzina, N., Liesack, W., Trotsenko, Y.   +5 more
openaire   +3 more sources

Biological conversion of methanol by evolved Escherichia coli carrying a linear methanol assimilation pathway

Bioresources and Bioprocessing, 2017
Background Methanol is regarded as a biorenewable platform feedstock because nearly all bioresources can be converted into methanol through syngas.
Xiaolu Wang, Yu Wang, Jiao Liu, Qinggang Li, Zhidan Zhang, Ping Zheng, Fuping Lu, Jibin Sun   +7 more
doaj   +1 more source

Impact of Copper on the Physiology and Transcriptome of Methylosinus Trichosporium OB3b Grown on Either Methane or Methanol

Environmental Microbiology, Volume 28, Issue 1, January 2026.
Methylosinus trichosporium OB3b can grow on methanol in the absence but not presence of copper due: (1) overgeneration of reducing power from methanol oxidation; (2) formate accumulation leading to acidification of the growth medium and inactivation of formate dehydrogenase; and (3) lack of expression of potential oxidative stress defence genes ...
Peng Peng, Jeremy D. Semrau
wiley   +1 more source

Genome information of Methylobacterium oryzae, a plant-probiotic methylotroph in the phyllosphere.

PLoS ONE, 2014
Pink-pigmented facultative methylotrophs in the Rhizobiales are widespread in the environment, and many Methylobacterium species associated with plants produce plant growth-promoting substances.
Min-Jung Kwak, Haeyoung Jeong, Munusamy Madhaiyan, Yi Lee, Tong-Min Sa, Tae Kwang Oh, Jihyun F Kim   +6 more
doaj   +1 more source

Spatial Heterogeneity in Methane Biogeochemistry and Prokaryotic Community Structure in Sub‐Arctic Waterbodies in Northern Canada

Environmental Microbiology, Volume 27, Issue 12, December 2025.
Prokaryotic communities and methane dynamics differed markedly across 16 sub‐Arctic waterbodies. Maximum depth and permafrost thaw emerged as key drivers, with non‐stratified thaw‐affected sites hosting distinct communities and elevated methane fluxes, highlighting their potential role as emerging hotspots of methane emissions.
Arthur Szylit, Urania Christaki, Maialen Barret, Léa Cabrol, Laure Gandois, Antoine Sejourne, Frédéric Bouchard, Sarah Ollivier, Ludwig Jardillier   +8 more
wiley   +1 more source

The Microbiome of the Seaweed Cultivar Ulva compressa (Chlorophyta) and Its Persistence Under Micropollutant Exposure

Environmental Microbiology Reports, Volume 17, Issue 6, December 2025.
Despite reduced bacterial diversity due to cultivation and subsequent micropollutant treatment, key bacterial functions are retained, promoting macroalgal growth and morphogenesis. ABSTRACT The green macroalga Ulva demonstrates exceptional growth rates, robustness, adaptability and potential for nitrogen and phosphorus removal; thus, it is a promising ...
Justus Hardegen, Gabriel Amend, Thomas Wichard   +2 more
wiley   +1 more source

Interactions of Methylotrophs with Plants and Other Heterotrophic Bacteria

Microorganisms, 2015
Methylotrophs, which can utilize methane and/or methanol as sole carbon and energy sources, are key players in the carbon cycle between methane and CO2, the two most important greenhouse gases.
Hiroyuki Iguchi, Hiroya Yurimoto, Yasuyoshi Sakai   +2 more
doaj   +1 more source