Genomics of Methylotrophy in Gram-Positive Methylamine-Utilizing Bacteria [PDF]
Microorganisms, 2015 Gram-positive methylotrophic bacteria have been known for a long period of time, some serving as model organisms for characterizing the specific details of methylotrophy pathways/enzymes within this group. However, genome-based knowledge of methylotrophy
Tami L Mctaggart +2 more
exaly +8 more sources
Diel cycle of lanthanide-dependent methylotrophy by TMED127/Methylaequorales bacteria in oligotrophic surface seawater [PDF]
Applied and Environmental MicrobiologyMethanol, the simplest alcohol, has long been known to be a key energy and carbon source for soil and plant-associated bacteria and fungi and is increasingly recognized as an important substrate for marine bacteria.
Jennifer B Glass
exaly +5 more sources
Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost [PDF]
MSystems, 2023 While wetlands are major sources of biogenic methane (CH4), our understanding of resident microbial metabolism is incomplete, which compromises the prediction of CH4 emissions under ongoing climate change. Here, we employed genome-resolved multi-omics to
Jared B Ellenbogen, Kelly C Wrighton
exaly +6 more sources
Unravelling Formaldehyde Metabolism in Bacteria: Road towards Synthetic Methylotrophy [PDF]
Microorganisms, 2022 Formaldehyde metabolism is prevalent in all organisms, where the accumulation of formaldehyde can be prevented through the activity of dissimilation pathways.
Vivien Jessica Klein +2 more
exaly +4 more sources
Methanol Dehydrogenases as a Key Biocatalysts for Synthetic Methylotrophy [PDF]
Frontiers in Bioengineering and Biotechnology, 2021 One-carbon (C1) chemicals are potential building blocks for cheap and sustainable re-sources such as methane, methanol, formaldehyde, formate, carbon monoxide, and more.
Thien-Kim Le +2 more
exaly +5 more sources
Beneath the surface: expanding the known repertoire of methylotrophic metabolism [PDF]
Applied and Environmental MicrobiologyAlthough the metabolic pathways that allow the utilization of one-carbon compounds as sole sources of carbon and energy (methylotrophy) are well characterized, this understanding has been substantially refined and expanded in recent years.
Eric L. Bruger, Jannell V. Bazurto
doaj +2 more sources
Evolutionary and functional relationships between plant and microbial C<sub>1</sub> metabolism in terrestrial ecosystems. [PDF]
New PhytolSummary One‐carbon (C1) metabolism, centered on the universal methyl donor S‐adenosyl methionine (SAM), plays critical roles in biosynthesis, redox regulation, and stress responses across plants and microbes. A recently proposed photosynthetic C1 pathway links SAM methyl groups directly to RuBisCO‐mediated CO2 assimilation and integrates with nitrogen ...
Jardine KJ +6 more
europepmc +2 more sources
Microbial Community Dynamics in Early Tufa Biofilms. [PDF]
MicrobiologyopenMicrobial succession shapes the early development of tufa biofilms in karst freshwater systems, with prokaryotic communities stabilizing rapidly and microeukaryotes contributing to extracellular polymeric substance production and carbonate entrapment. Site‐specific hydrodynamics and organic inputs drive community specialization, ultimately influencing ...
Čačković A +3 more
europepmc +2 more sources
Unifying microorganisms and macrograzers in intertidal rocky shore ecological networks. [PDF]
EcologyAbstract Over the past decades, our understanding of the vital role microbes play in ecosystem processes has greatly expanded. However, we still have limited knowledge about how microbial communities interact with larger organisms. Many existing representations of microbial interactions are based on co‐occurrence patterns, which do not provide clear ...
Arboleda-Baena C +7 more
europepmc +2 more sources
Off-target metagenomics: Leveraging whole genome sequencing to study the bacteriome of the liverwort <i>Calasterella californica</i>. [PDF]
Appl Plant SciAbstract Premise The recovery of non‐target organism reads, especially when whole organisms are sampled, constitutes a great opportunity for studying microbial communities. The increase in whole genome sequencing feasibility and the development of new marker‐based pipelines enable the use of short reads to study bacterial communities associated with ...
González-Ramírez IS +3 more
europepmc +2 more sources