Phylogenomic Reconstruction and Metabolic Potential of the Genus Aminobacter
Microorganisms, 2021 Bacteria belonging to the genus Aminobacter are metabolically versatile organisms thriving in both natural and anthropized terrestrial environments. To date, the taxonomy of this genus is poorly defined due to the unavailability of the genomic sequence ...
Irene Artuso +5 more
doaj +1 more source
Direct Observation of the Dynamics of Single-Cell Metabolic Activity during Microbial Diauxic Growth
mBio, 2020 Population-level analyses are rapidly becoming inadequate to answer many of biomedical science and microbial ecology’s most pressing questions. The role of microbial populations within ecosystems and the evolutionary selective pressure on individuals ...
H. L. O. McClelland +4 more
doaj +1 more source
Microorganisms, 2022 Dichloromethane (DCM, methylene chloride) is a toxic halogenated volatile organic compound massively used for industrial applications, and consequently often detected in the environment as a major pollutant.
Bruno Maucourt +4 more
doaj +1 more source
Off-target metagenomics: Leveraging whole genome sequencing to study the bacteriome of the liverwort <i>Calasterella californica</i>. [PDF]
Appl Plant SciAbstract Premise The recovery of non‐target organism reads, especially when whole organisms are sampled, constitutes a great opportunity for studying microbial communities. The increase in whole genome sequencing feasibility and the development of new marker‐based pipelines enable the use of short reads to study bacterial communities associated with ...
González-Ramírez IS +3 more
europepmc +2 more sources
Genome of Methylobacillus flagellatus , Molecular Basis for Obligate Methylotrophy, and Polyphyletic Origin of Methylotrophy [PDF]
Journal of Bacteriology, 2007 ABSTRACT Along with methane, methanol and methylated amines represent important biogenic atmospheric constituents; thus, not only methanotrophs but also nonmethanotrophic methylotrophs play a significant role in global carbon cycling.
Chistoserdova, Ludmila +10 more
openaire +4 more sources
Aerobic Methoxydotrophy: Growth on Methoxylated Aromatic Compounds by Methylobacteriaceae
Frontiers in Microbiology, 2022 Pink-pigmented facultative methylotrophs have long been studied for their ability to grow on reduced single-carbon (C1) compounds. The C1 groups that support methylotrophic growth may come from a variety of sources.
Jessica A. Lee +9 more
doaj +1 more source
Lanthanide-Dependent Methanol and Formaldehyde Oxidation in Methylobacterium aquaticum Strain 22A
Microorganisms, 2020 Lanthanides (Ln) are an essential cofactor for XoxF-type methanol dehydrogenases (MDHs) in Gram-negative methylotrophs. The Ln3+ dependency of XoxF has expanded knowledge and raised new questions in methylotrophy, including the differences in ...
Patcha Yanpirat +8 more
doaj +1 more source
Fruit function beyond dispersal: effect of fruit decomposition on the plant microbiome assembly. [PDF]
New PhytolSummary The evolutionary role of fruits has primarily been linked to seed dispersal. However, their influence on the soil and plant microbiomes subsequent to their decomposition has received no attention. We hypothesized that fruit decomposition alters the soil microbiome, and consequently the plant microbiome and performance.
Hoefle D +8 more
europepmc +2 more sources
Microorganisms, 2015 We have expressed the l-malate dehydrogenase (MDH) genes from aerobic methanotrophs Methylomicrobium alcaliphilum 20Z and Methylosinus trichosporium OB3b as his-tagged proteins in Escherichia coli.
Olga N. Rozova +4 more
doaj +1 more source
Autotrophic methylotrophy with no methanol dehydrogenase (MDH) in a strain of fluorescent <i>Pseudomonas</i>. [PDF]
PeerJBackground Very few true Pseudomonas methylotrophic strains have been described, and in none of them have the pathways for one-carbon (C 1 ) substrate metabolism been elucidated.
De Marco P.
europepmc +4 more sources