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Association Analysis Techniques for Discovering Functional Modules from Microarray Data [PDF]

open access: yesNature Precedings, 2008
AbstractAn application of great interest in microarray data analysis is the identification of a group of genes that show very similar patterns of expression in a data set, and are expected to represent groups of genes that perform common/similar functions, also known as functional modules.
Gaurav Pandey   +3 more
core   +3 more sources

Tetrahymena thermophila Functional Genomics Database

open access: yes中国科学数据, 2022
Tetrahymena thermophila is an excellent unicellular eukaryote. Since T. thermophila could be purely cultured in the lab, well established molecular and genetic techniques and clear genetic ...
Yang Wentao   +6 more
doaj   +1 more source

Gene expression analysis of glucocorticoid-induced apoptosis by a gene microarray technique [PDF]

open access: yesNature Genetics, 2001
Gene expression analysis of glucocorticoid-induced apoptosis by a gene microarray ...
Huiling He   +3 more
openaire   +1 more source

A Fully Automated Spot Detection Approach for cDNA Microarray Images Using Adaptive Thresholds and Multi-Resolution Analysis

open access: yesIEEE Access, 2019
The problem of gridding microarray images remains a challenging task. This is because microarray images are usually contaminated with noise and artifacts, such as low intensity and poor quality spots.
Mary Monir Saeid   +2 more
doaj   +1 more source

Pre-implantation Genetic Testing for Aneuploidy (PGT-A)

open access: yesThai Journal of Obstetrics and Gynaecology, 2020
Preimplantation genetic diagnosis (PGD) or embryo selection was first performed in 1989 using PCR for gender selection to avoid X-linked recessive disorder. However, there was a misdiagnosis due to allele drop out (ADO). Therefore, fluorescent in situ
Wirawit Piyamongkol
doaj   +1 more source

Operon information improves gene expression estimation for cDNA microarrays

open access: yesBMC Genomics, 2006
Background In prokaryotic genomes, genes are organized in operons, and the genes within an operon tend to have similar levels of expression. Because of co-transcription of genes within an operon, borrowing information from other genes within the same ...
Pan Wei   +3 more
doaj   +1 more source

An efficient approach for gene selection through parallel bio-inspired algorithms and Shapley value analysis [PDF]

open access: yesInternational Journal of Research in Industrial Engineering
The fast development of microarray technology has significantly assisted in the use of gene expression analysis to forecast cancer subtypes. Analyzing high-dimensional microarray data is still challenging, as existing hybrid methods cannot find highly ...
Vijaya Lakshmi Alluri   +3 more
doaj   +1 more source

Gene set enrichment meta-learning analysis: next- generation sequencing versus microarrays

open access: yesBMC Bioinformatics, 2010
Background Reproducibility of results can have a significant impact on the acceptance of new technologies in gene expression analysis. With the recent introduction of the so-called next-generation sequencing (NGS) technology and established microarrays ...
Bajgot Mateja   +2 more
doaj   +1 more source

DNA microarray technology in medical diagnostics

open access: yesZdravniški Vestnik, 2007
Background: DNA microarray technology opened a completely new venue in the biomedical research. By allowing to follow the expression of thousands of genes in a single experiment (ideally we can follow the expression of the entire genome), the microarray ...
Damjana Rozman, Peter Juvan
doaj  

Triple-target microarray experiments: a novel experimental strategy

open access: yesBMC Genomics, 2004
Background High-throughput, parallel gene expression analysis by means of microarray technology has become a widely used technique in recent years. There are currently two main dye-labelling strategies for microarray studies based on custom-spotted cDNA ...
Cooke Howard J   +4 more
doaj   +1 more source

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