Results 1 to 10 of about 103,437 (164)

Microbial solutions must be deployed against climate catastrophe

npj Biofilms and Microbiomes
This paper is a call to action. By publishing concurrently across journals like an emergency bulletin, we are not merely making a plea for awareness about climate change.
Raquel Peixoto, Christian R. Voolstra, Lisa Y. Stein, Philip Hugenholtz, Joana Falcao Salles, Shady A. Amin, Max Häggblom, Ann Gregory, Thulani P. Makhalanyane, Fengping Wang, Nadège Adoukè Agbodjato, Yinzhao Wang, Nianzhi Jiao, Jay T. Lennon, Antonio Ventosa, Patrik M. Bavoil, Virginia Miller, Jack A. Gilbert   +17 more
doaj   +7 more sources

Disentangling the genetic basis of rhizosphere microbiome assembly in tomato

Nature Communications, 2022
Genetics factors involved in rhizosphere microbiomes assembly remain largely elusive. Here, the authors integrate microbiomics and quantitative plant genetics to reveal genetic loci associated with specific microbes and rhizobacterial traits underlying ...
Ben O. Oyserman, Stalin Sarango Flores, Thom Griffioen, Xinya Pan, Elmar van der Wijk, Lotte Pronk, Wouter Lokhorst, Azkia Nurfikari, Joseph N. Paulson, Mercedeh Movassagh, Nejc Stopnisek, Anne Kupczok, Viviane Cordovez, Víctor J. Carrión, Wilco Ligterink, Basten L. Snoek, Marnix H. Medema, Jos M. Raaijmakers   +17 more
doaj   +1 more source

Optimization of Parameters Using Response Surface Methodology to Develop a Novel Kefir-Like Functional Beverage from Cheese Whey Enriched with Myrtle Juice

Journal of Chemistry, 2021
Whey, liquid wastewater from cheese production, is one of the sources of dietary protein and lactose that are still largely unused for human consumption.
Sana M’hir, Asma Mejri, Hajer Atrous, Lamia Ayed   +3 more
doaj   +1 more source

Successive DNA extractions improve characterization of soil microbial communities [PDF]

PeerJ, 2017
Currently, characterization of soil microbial communities relies heavily on the use of molecular approaches. Independently of the approach used, soil DNA extraction is a crucial step, and success of downstream procedures will depend on how well DNA ...
Mauricio R. Dimitrov, Annelies J. Veraart, Mattias de Hollander, Hauke Smidt, Johannes A. van Veen, Eiko E. Kuramae   +5 more
doaj   +2 more sources

DiSCount: computer vision for automated quantification of Striga seed germination

Plant Methods, 2020
Background Plant parasitic weeds belonging to the genus Striga are a major threat for food production in Sub-Saharan Africa and Southeast Asia. The parasite’s life cycle starts with the induction of seed germination by host plant-derived signals ...
Raul Masteling, Lodewijk Voorhoeve, Joris IJsselmuiden, Francisco Dini-Andreote, Wietse de Boer, Jos M. Raaijmakers   +5 more
doaj   +1 more source

Impact of root-associated strains of three Paraburkholderia species on primary and secondary metabolism of Brassica oleracea

Scientific Reports, 2021
Several root-colonizing bacterial species can simultaneously promote plant growth and induce systemic resistance. How these rhizobacteria modulate plant metabolism to accommodate the carbon and energy demand from these two competing processes is largely ...
Je-Seung Jeon, Natalia Carreno-Quintero, Henriëtte D. L. M. van Eekelen, Ric C. H. De Vos, Jos M. Raaijmakers, Desalegn W. Etalo   +5 more
doaj   +1 more source

Resilience of the resident soil microbiome to organic and inorganic amendment disturbances and to temporary bacterial invasion

Microbiome, 2018
Background Vinasse, a by-product of sugarcane ethanol production, is recycled by sugarcane plantations as a fertilizer due to its rich nutrient content. However, the impacts of the chemical and microbial composition of vinasse on soil microbiome dynamics
Késia Silva Lourenço, Afnan K. A. Suleiman, A. Pijl, J. A. van Veen, H. Cantarella, E. E. Kuramae   +5 more
doaj   +1 more source

Draft genome sequences of three fungal-interactive Paraburkholderia terrae strains, BS007, BS110 and BS437

Standards in Genomic Sciences, 2017
Here, we report the draft genome sequences of three fungal-interactive Paraburkholderia terrae strains, denoted BS110, BS007 and BS437. Phylogenetic analyses showed that the three strains belong to clade II of the genus Burkholderia , which was recently ...
Akbar Adjie Pratama, Irshad Ul Haq, Rashid Nazir, Maryam Chaib De Mares, Jan Dirk van Elsas   +4 more
doaj   +1 more source

Multiyear analysis uncovers coordinated seasonality in stocks and composition of the planktonic food web in the Baltic Sea proper

Scientific Reports, 2023
The planktonic realm from bacteria to zooplankton provides the baseline for pelagic aquatic food webs. However, multiple trophic levels are seldomly included in time series studies, hampering a holistic understanding of the influence of seasonal dynamics
Emil Fridolfsson, Carina Bunse, Elin Lindehoff, Hanna Farnelid, Benjamin Pontiller, Kristofer Bergström, Jarone Pinhassi, Catherine Legrand, Samuel Hylander   +8 more
doaj   +1 more source

Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia

Microbiome, 2019
Background Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers of origin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood.
Juan E. Pérez-Jaramillo, Mattias de Hollander, Camilo A. Ramírez, Rodrigo Mendes, Jos M. Raaijmakers, Víctor J. Carrión   +5 more
doaj   +1 more source