Microbial Genomics: Innovative Targets and Mechanisms. [PDF]
Antibiotics (Basel), 2023 Multidrug resistance (MDR) has become an increasing threat to global health because bacteria can develop resistance to antibiotics over time. Scientists worldwide are searching for new approaches that go beyond traditional antibiotic discovery and ...
Alkatheri AH +5 more
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Microbial genomics amidst the Arctic crisis. [PDF]
Microb Genom, 2020 The Arctic is warming – fast. Microbes in the Arctic play pivotal roles in feedbacks that magnify the impacts of Arctic change. Understanding the genome evolution, diversity and dynamics of Arctic microbes can provide insights relevant for both ...
Edwards A +6 more
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The Importance of Genome Sequence Quality to Microbial Comparative Genomics [PDF]
BMC Genomics, 2019 The quality of microbial genome sequences has been a concern ever since the emergence of genome sequencing. The quality of the genome assemblies is dependent on the sequencing technology used and the aims for which the sequence was generated.
Theo H M Smits
exaly +3 more sources
Editorial: Extremophiles: Microbial genomics and taxogenomics. [PDF]
Front Microbiol, 2022 COPYRIGHT © 2022 de la Haba, Antunes and Hedlund. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY).
de la Haba RR, Antunes A, Hedlund BP.
europepmc +2 more sources
Trajectories of freshwater microbial genomics and greenhouse gas saturation upon glacial retreat. [PDF]
Nat Commun, 2023 Due to climate warming, ice sheets around the world are losing mass, contributing to changes across terrestrial landscapes on decadal time spans. However, landscape repercussions on climate are poorly constrained mostly due to limited knowledge on ...
Wei J +5 more
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Evolution of Microbial Genomics: Conceptual Shifts over a Quarter Century. [PDF]
Trends Microbiol, 2021 Prokaryote genomics started in earnest in 1995, with the complete sequences of two small bacterial genomes, those of Haemophilus influenzae and Mycoplasma genitalium.
Koonin EV, Makarova KS, Wolf YI.
europepmc +2 more sources
M1CR0B1AL1Z3R-a user-friendly web server for the analysis of large-scale microbial genomics data. [PDF]
Nucleic Acids Res, 2019 Large-scale mining and analysis of bacterial datasets contribute to the comprehensive characterization of complex microbial dynamics within a microbiome and among different bacterial strains, e.g., during disease outbreaks.
Avram O +3 more
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DAMBE6: New Tools for Microbial Genomics, Phylogenetics, and Molecular Evolution. [PDF]
J Hered, 2017 DAMBE is a comprehensive software workbench for data analysis in molecular biology, phylogenetics, and evolution. Several important new functions have been added since version 5 of DAMBE: 1) comprehensive genomic profiling of translation initiation ...
Xia X.
europepmc +2 more sources
High-throughput automated microfluidic sample preparation for accurate microbial genomics. [PDF]
Nat Commun, 2017 Low-cost shotgun DNA sequencing is transforming the microbial sciences. Sequencing instruments are so effective that sample preparation is now the key limiting factor.
Kim S +10 more
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Big data or bust: realizing the microbial genomics revolution. [PDF]
Microb Genom, 2016 Pathogen genomics has the potential to transform the clinical and public health management of infectious diseases through improved diagnosis, detection and tracking of antimicrobial resistance and outbreak control.
Raza S, Luheshi L.
europepmc +2 more sources