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THz-ATR Spectroscopy Integrated with Species Recognition Based on Multi-Classifier Voting for Automated Clinical Microbial Identification [PDF]

open access: yesBiosensors, 2022
The demand for rapid and accurate identification of microorganisms is growing due to considerable importance in all areas related to public health and safety.
Wenjing Yu   +9 more
doaj   +2 more sources

A comprehensive technology strategy for microbial identification and contamination investigation in the sterile drug manufacturing facility—a case study [PDF]

open access: yesFrontiers in Microbiology
ObjectiveA comprehensive strategy for microbial identification and contamination investigation during sterile drug manufacturing was innovatively established in this study, mainly based on MALDI-TOF MS for the identification and complemented by ...
Minghui Song   +17 more
doaj   +2 more sources

Microbial identification by mass cataloging [PDF]

open access: yesBMC Bioinformatics, 2006
Background The public availability of over 180,000 bacterial 16S ribosomal RNA (rRNA) sequences has facilitated microbial identification and classification using hybridization and other molecular approaches.
Fox George E   +3 more
doaj   +3 more sources

Pyrosequencing for microbial identification and characterization. [PDF]

open access: yesJ Vis Exp, 2013
Pyrosequencing is a versatile technique that facilitates microbial genome sequencing that can be used to identify bacterial species, discriminate bacterial strains and detect genetic mutations that confer resistance to anti-microbial agents. The advantages of pyrosequencing for microbiology applications include rapid and reliable high-throughput ...
Cummings PJ   +5 more
europepmc   +4 more sources

BacT-Seq, a Nanopore-Based Whole-Genome Sequencing Workflow Prototype for Rapid and Accurate Pathogen Identification and Resistance Prediction from Positive Blood Cultures: A Feasibility Study [PDF]

open access: yesDiagnostics
Background/Objectives: Rapid and accurate pathogen identification and antimicrobial susceptibility testing (AST) are critical for the proper management of patients with bloodstream infection (BSI).
Meriem El Azami   +14 more
doaj   +2 more sources

Assessing the efficiency of microplastics extraction methods for tropical beach sediments and matrix preparation for experimental controls

open access: yesFrontiers in Marine Science, 2023
IntroductionMicroplastic pollution has become a global issue, eliciting attention not just from the scientific community but also both from the public and governmental bodies.
Jan Danielle P. Bonita   +6 more
doaj   +1 more source

Current Scenario and Challenges in the Direct Identification of Microorganisms Using MALDI TOF MS

open access: yesMicroorganisms, 2021
MALDI TOF MS-based microbial identification significantly lowers the operational costs because of minimal requirements of substrates and reagents for extraction.
Sang-Soo Han   +2 more
doaj   +1 more source

SPECIFIC MICROBIOLOGY SPECTRUM OF WHITE SAND MUSSELS FROM KEY SAMPLE SPOTS FROM BULGARIAN BLACK SEA AQUATORY [PDF]

open access: yesJournal of IMAB, 2021
The "white sand mussels" are edible bivalves inhabiting the littoral shores usually buried in the sand. Тhey are invasive species for the Bulgarian waters of the Black Sea.
Borislava K. Pavlova   +7 more
doaj   +1 more source

Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences [PDF]

open access: yes, 2013
The high throughput and cost-effectiveness afforded by short-read sequencing technologies, in principle, enable researchers to perform 16S rRNA profiling of complex microbial communities at unprecedented depth and resolution. Existing Illumina sequencing
Hibberd, Martin Lloyd   +7 more
core   +14 more sources

Application and Perspectives of MALDI–TOF Mass Spectrometry in Clinical Microbiology Laboratories

open access: yesMicroorganisms, 2021
Early diagnosis of severe infections requires of a rapid and reliable diagnosis to initiate appropriate treatment, while avoiding unnecessary antimicrobial use and reducing associated morbidities and healthcare costs.
Eva Torres-Sangiao   +2 more
doaj   +1 more source

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