Results 61 to 70 of about 68,764 (347)

Modified ResNet Model for MSI and MSS Classification of Gastrointestinal Cancer [PDF]

arXiv, 2022
In this work, a modified ResNet model is proposed for the classification of Microsatellite instability(MSI) and Microsatellite stability(MSS) of gastrointestinal cancer. The performance of this model is analyzed and compared with existing models. The proposed model surpassed the existing models with an accuracy of 0.8981 and F1 score of 0.9178.
arxiv  

Development of Sequence Tagged Microsatellite Site (STMS) markers in Azalea [PDF]

A genomic library was constructed from DNA of two azalea genotypes: a Belgian pot azalea R. simsii hybrid Mevr. Van Belle and a Chinese R. simsii from Daoxian.
Arens, P., Bockstaele, E., van, Dendauw, J., Loose, M., de, Riek, J., de, Vosman, B.   +5 more
core   +2 more sources

Isolation of polymorphic microsatellites in the stemless thistle (Cirsium acaule) and their utility in other Cirsium species [PDF]

, 2002
The genus Cirsium includes species with both widespread and restricted geographical distributions, several of which are serious weeds. Nine polymorphic microsatellite loci were isolated from the stemless thistle Cirsium acaule.
Alistair S. Jump, Bassam BJ, Belkhir K, Brownstein MJ, Celia M. James, Deborah A. Dawson, Doyle JJ, Edwards KJ, F. Ian. Woodward, Lagercrantz U, Peakall RS, Terry Burke, Whitton J   +12 more
core   +1 more source

Signatures of Population Expansion in Microsatellite Repeat Data

Genetics, 1998
Abstract To examine the signature of population expansion on genetic variability at microsatellite loci, we consider a population that evolves according to the time-continuous Moran model, with growing population size and mutations that follow a general asymmetric stepwise mutation model.
Marek Kimmel, J. Patrick King, W. Scott Watkins, Michael J. Bamshad, Lynn B. Jorde, Ranajit Chakraborty   +5 more
openaire   +3 more sources

Towards conservation and sustainable use of an indigenous crop: A large partnership network enabled the genetic diversity assessment of 1539 fonio (Digitaria exilis) accessions

PLANTS, PEOPLE, PLANET, EarlyView., 2023
The use of neglected and underutilized species (NUS) in agrosystems is a potential solution to the challenges arising from global change. These species could contribute to the equitable diversification of agricultural systems. Providing knowledge on their genetic diversity and fostering access to data and results is essential for the development of ...
Thomas Kaczmarek, Sandrine Causse, Suleiman D. Abdul, Solomon Abraham, Enoch G. Achigan‐Dako, Charlotte Adje, Joseph Adjebeng‐Danquah, Richard Y. Agyare, Louise Akanvou, Yacoubou Bakasso, Mamadou B. Barry, Samuel K. Bonsu, Caroline Calatayud, Soukeye Conde, Marie Couderc, Stephen N. Dachi, Tely Diallo, Baye M. Diop, Monique Deu, Mame C. Gueye, Abdou R. Ibrahim Bio Yerima, Abdul R. Issah, Ndjido A. Kane, Yeremakhan Keita, James Kombiok, Ablaye Ngom, Jean‐Louis Noyer, Katina Olodo, Happiness O. Oselebe, Jean‐Louis Pham, Marie Piquet, Doris K. Puozaa, Ronan Rivallan, Sani Saidou, Emmanuel Sekloka, Theophilus K. Tengey, Edak A. Uyoh, Sylvie Vancoppenolle, Yves Vigouroux, Leila Zekraoui, Christian Leclerc, Adeline Barnaud, Claire Billot   +42 more
wiley   +1 more source

A Method for Improving the Detection Accura-cy of MSIsensor Based on Downsampling [PDF]

arXiv, 2023
Motivation: Microsatellite instability (MSI) is a cancer biomarker associated with cancer prognosis and chemotherapy sensitivity. Since the discovery of MSI, polymerase chain reaction (PCR)-based testing has been considered the gold standard for MSI detection.
arxiv  

Machine learning classification of CHIME fast radio bursts -- I. Supervised methods [PDF]

, 2022
Observationally, the mysterious fast radio bursts (FRBs) are classified as repeating ones and apparently non-repeating ones. While repeating FRBs cannot be classified into the non-repeating group, it is unknown whether the apparently non-repeating FRBs are actually repeating FRBs whose repetitions are yet to be discovered, or whether they belong to ...
arxiv   +1 more source

Identification and validation of microsatellite markers in strawberry tree (Arbutusunedo L.) [PDF]

, 2019
Strawberry tree (Arbutus unedo L.), an evergreen shrub/small tree of the family Ericaceae, is a main constituent of the Mediterranean basin flora; although it is also found in southwestern Prance, Macaronesia, and Ireland. The small fruits are edible but
Carlier, Jorge, Fazenda, Pedro, Fonseca, Maria, Leitão, José, Pereira, Ricardo   +4 more
core   +1 more source

Ethnolinguistic and genetic diversity of fonio (Digitaria exilis) in Senegal

PLANTS, PEOPLE, PLANET, EarlyView., 2023
Fonio (Digitaria exilis—Kippist—Stapf) is a neglected cereal crop that plays a crucial role in the food and nutritional security of sub‐Saharan populations. Currently threatened with extinction in many countries, fonio, like other minor species, could help give insights into the history of African agriculture and provide clues to past social ...
Baye Magatte Diop, Mame Codou Guèye, Christian Leclerc, Monique Deu, Leila Zekraoui, Carolina Calatayud, Ronan Rivallan, Justin Raymond Kaly, Momar Cissé, Marie Piquet, Omar Diack, Ablaye Ngom, Angélique Berger, Ibrahima Ndoye, Khadidiatou Ndir, Yves Vigouroux, Ndjido Ardo Kane, Adeline Barnaud, Claire Billot   +18 more
wiley   +1 more source

Investigation of a candidemia outbreak caused by C. parapsilosis in a pediatric hematology/oncology center [PDF]

Клиническая микробиология и антимикробная химиотерапия, 2020
Objective. To investigate a candidemia outbreak caused by C. parapsilosis in a clinical unit of the Dmitry Rogachev National Medical Research Center of Pediatric Hematology, Oncology and Immunology (NMRC PHOI). Materials and Methods.
Kozhushnaya O.S., Solopova G.G., Voropaev A.D., Markova Zh.V., Satsuk A.V., Balamozhnova A.O., Novichkova G.A.   +6 more
doaj   +1 more source