Results 71 to 80 of about 55,724 (327)

The First Microsatellite-based Characterisation of Blastocystis sp. ST3 Isolates and Population Structure Analysis

Türkiye Parazitoloji Dergisi
Objective: Blastocystis sp. is an intestinal Stramenopile that can infect both humans and animals. Genetic variability of Blastocystis has been investigated with a variety of molecular methods and different subtypes (ST) have been identified. The present
Sema Ertuğ, Erdoğan Malatyalı, Hatice Ertabaklar, Bülent Bozdoğan, Mahmut Sinecen, Özgür Güçlü   +5 more
doaj   +1 more source

Isolation and Characterization of Microsatellite Markers for Shorea platyclados (Dipterocarpaceae)

Applications in Plant Sciences, 2013
Premise of the study: Microsatellite markers were isolated and characterized in Shorea platyclados (Dipterocarpaceae) for DNA profiling and genetic diversity assessment of this tropical timber species.
Chin Hong Ng, Chai Ting Lee, Soon Leong Lee, Lee Hong Tnah, Kevin Kit Siong Ng   +4 more
doaj   +1 more source

Pulse-Field capillary electrophoresis of repeat-primed PCR amplicons for analysis of large repeats in Spinocerebellar Ataxia Type 10.

PLoS ONE, 2020
Large expansions of microsatellite DNA cause several neurological diseases. In Spinocerebellar ataxia type 10 (SCA10), the repeat interruptions change disease phenotype; an (ATTCC)n or a (ATCCT)n/(ATCCC)n interruption within the (ATTCT)n repeat is ...
Vera Hashem, Anjana Tiwari, Brittani Bewick, Helio A G Teive, Mariana Moscovich, Birgitt Schüele, Khalaf Bushara, Matt Bower, Astrid Rasmussen, Yu-Chih Tsai, Tyson Clark, Karen McFarland, Tetsuo Ashizawa   +12 more
doaj   +1 more source

Generation of microsatellite repeat families by RTE retrotransposons in lepidopteran genomes [PDF]

BMC Evolutionary Biology, 2010
Abstract Background Developing lepidopteran microsatellite DNA markers can be problematical, as markers often exhibit multiple banding patterns and high frequencies of non-amplifying "null" alleles. Previous studies identified sequences flanking simple sequence repeat (SSR) units that are shared among many ...
Gajanan T. Behere, Wee Tek Tay, Wee Tek Tay, Philip J. Batterham, David G. Heckel   +4 more
openaire   +6 more sources

POLE Deficiency Exacerbates Diesel Engine Exhaust‐Induced Genomic Instability and Malignant Transformation of Bronchial Epithelial Cells

Advanced Science, EarlyView.
This study establishes a diesel engine exhaust (DEE)‐induced malignant transformation model in bronchial epithelial cells. Whole genome sequencing（WGS） and RNA‐seq reveal DEE‐induced mutational signatures and gene expression profiles. Mechanistically, DEEaffect polymerase epsilon (POLE) and mismatch repair, driving genomic instability and promoting ...
Pimei Zhang, Zhaoxu Wu, Qiang Ju, Nuo Xu, Xian Chen, Hongguang Chen, Shuaishuai Yang, Jing Ji, Yanjie Zhao   +8 more
wiley   +1 more source

Microsatellite characterization and marker development for the fungus Penicillium digitatum, causal agent of green mold of citrus

MicrobiologyOpen, 2019
Penicillium digitatum is one of the most important postharvest pathogens of citrus on a global scale causing significant annual losses due to fruit rot. However, little is known about the diversity of P. digitatum populations. The genome of P.
Erika S. Varady, Sohrab Bodaghi, Georgios Vidalakis, Greg W. Douhan   +3 more
doaj   +1 more source

Data Mining for Simple Sequence Repeats in Oil Palm Expressed Sequence Tags [PDF]

, 2009
Expressed Sequence Tags or ESTs are small pieces of DNA sequence that are generated by sequencing either one or both ends of an expressed gene. ESTs provide researchers with a quick and inexpensive route for discovering new genes, for obtaining data on ...
Aikkal Riju, Vadivel Arunachalam
core   +1 more source

Microsatellite typing of avian clinical and environmental isolates of Aspergillus fumigatus [PDF]

, 2011
Aspergillosis is one of the most common causes of death in captive birds. Aspergillosis in birds is mainly caused by Aspergillus fumigatus, a ubiquitous and opportunistic saprophyte.
Beernaert, Lies, Dorrestein, Gerry M, Haesebrouck, Freddy, Klaassen, Corné HW, Martel, An, Pasmans, Frank, Van Waeyenberghe, Lieven, Vercammen, Francis, Verstappen, Frank   +8 more
core   +3 more sources

MALMPS: A Machine Learning‐Based Metabolic Gene Prognostic Signature for Stratifying Clinical Outcomes and Molecular Heterogeneity in Stage II/III Colorectal Cancer

Advanced Science, EarlyView.
Chen et al. identified a metabolic gene prognostic signature with machine‐learning framework and assessed the prognostic value in independent CRC cohorts. The metabolic signature subtypes are characterized by specific metabolic and proteomic characteristics, and associated with distinct molecular pathway and therapeutic potential.
Hao Chen, Ze Wang, Chenglong Sun, Yang Zhong, Yuan Liu, Yikun Li, Tongchao Zhang, Yuan Zhang, Xingyu Zhu, Leping Li, Feifei Teng, Ming Lu, Wei Chong   +12 more
wiley   +1 more source

Microsatellite instability at a tetranucleotide repeat in type I endometrial carcinoma [PDF]

Journal of Experimental & Clinical Cancer Research, 2008
Abstract Background Microsatellite instability (MSI) at tri- or tetranucleotide repeat markers (elevated microsatellite alterations at selected tetranucleotide repeat, EMAST) has been recently described. But, the underlying genetic mechanism of EMAST is unclear.
Ji Shin Lee, Jo Heon Kim, Ho Sun Choi, Chan Choi, Chang Soo Park, Jae Hyuk Lee, Jin Choi, Jong Hee Nam, Min-Cheol Lee, Sang Woo Juhng, Yoo Duk Choi   +10 more
openaire   +4 more sources