Results 11 to 20 of about 745,863 (262)
Different NIPBL requirements of cohesin-STAG1 and cohesin-STAG2
Nature Communications, 2023 NIPBL is considered the cohesin loader. Here, the authors report that a drastic reduction of NIPBL levels reduces chromatin-bound cohesin-STAG2 genome wide while cohesin-STAG1 increases and can still be found at CTCF-bound sites but cannot form loops.
Dácil Alonso-Gil +4 more
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eLife, 2022 The rapid development of new imaging approaches is generating larger and more complex datasets, revealing the time evolution of individual cells and biomolecules. Single-molecule techniques, in particular, provide access to rare intermediates in complex,
Nadia M Huisjes +7 more
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BMC Biology, 2020 Background The accumulation of mtDNA mutations in different tissues from various mouse models has been widely studied especially in the context of mtDNA mutation-driven ageing but has been confounded by the inherent limitations of the most widely used ...
Emilie Kristine Bagge +4 more
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Physical Review E, 2015 A new approach to simulating warm and hot dense matter that combines density functional theory based calculations of the electronic structure to classical molecular dynamics simulations with pair interaction potentials is presented. The new method, which we call pseudoatom molecular dynamics (PAMD), can be applied to single or multi-component plasmas ...
Starrett, C. E. +2 more
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Fermionic molecular dynamics [PDF]
Nuclear Physics A, 1989 Abstract A new type of molecular dynamics is proposed to solve approximately the many-body problem of interacting identical fermions with spin 1 2 . The interacting system is represented by an antisymmetrized many-body wave function consisting of single-particle states which are localized in phase space.
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Molecular dynamics simulations [PDF]
Current Biology, 1997 Originally the province of theorists only, molecular dynamics simulations are now accessible to a broad range of scientists. Advances in methodology, coupled with the development of fast and relatively inexpensive computer workstations, have increased the efficiency, accuracy, reliability, and applicability of these methods. Crossing important research
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Scientific Reports, 2022 In the quest for more effective radiation treatment options that can improve both cell killing and healthy tissue recovery, combined radiation therapies are lately in the spotlight.
Pilar López-Nieva +8 more
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Coupling Constant pH Molecular Dynamics with Accelerated Molecular Dynamics [PDF]
Journal of Chemical Theory and Computation, 2010 An extension of the constant pH method originally implemented by Mongan et al. (J. Comput. Chem.2004, 25, 2038-2048) is proposed in this study. This adapted version of the method couples the constant pH methodology with the enhanced sampling technique of accelerated molecular dynamics, in an attempt to overcome the sampling issues encountered with ...
Williams, Sarah L +2 more
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Nature Communications, 2020 Multidimensional electronic spectroscopy techniques still have many limitations. Here, the authors introduce a 2D electronic spectroscopy technique that uses broadband, synchronized mode-locked lasers to study dynamics on a wide range of timescales.
JunWoo Kim +3 more
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Excitonic Bloch–Siegert shift in CsPbI3 perovskite quantum dots
Nature Communications, 2022 Observation of a Bloch-Siegert shift has remained elusive. Here, Wu et al, reports spin-selective Bloch-Siegert shift in lead halide perovskite quantum dots, and highlights the importance of many-body interactions in correctly modeling the shift.
Yuxuan Li +8 more
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