Results 41 to 50 of about 2,051,496 (327)
Molecular Dynamics Simulation of Vascular Network Formation
, 2009 Endothelial cells are responsible for the formation of the capillary blood vessel network. We describe a system of endothelial cells by means of two-dimensional molecular dynamics simulations of point-like particles.
Buttà, Paolo +3 more
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Influence of homocysteine on the physical structure and molecular mobility of elastin network in cultured arteries [PDF]
, 2009 The thermal and dielectric properties of the elastin network were investigated in arteries cultured with physiological and pathological concentrations of homocysteine, an aminoacid responsible of histological impairments in human arteries.
Chareyre, Corinne +6 more
core +2 more sources
Frontiers in Oncology, 2021 RNA-binding motif protein 8A (RBM8A) is abnormally overexpressed in hepatocellular carcinoma (HCC) and involved in the epithelial-mesenchymal transition (EMT).
Rong Liang +8 more
doaj +1 more source
Molecular hypergraph neural networks
The Journal of Chemical PhysicsGraph neural networks (GNNs) have demonstrated promising performance across various chemistry-related tasks. However, conventional graphs only model the pairwise connectivity in molecules, failing to adequately represent higher order connections, such as multi-center bonds and conjugated structures.
Junwu Chen, Philippe Schwaller
openaire +3 more sources
Topology of molecular interaction networks [PDF]
BMC Systems Biology, 2013 Molecular interactions are often represented as network models which have become the common language of many areas of biology. Graphs serve as convenient mathematical representations of network models and have themselves become objects of study. Their topology has been intensively researched over the last decade after evidence was found that they share
Winterbach, W. (author) +4 more
openaire +4 more sources
Frontiers in Plant Science, 2023 IntroductionIn contrast to the dynamics observed in plant/pathogen interactions, endophytic fungi have the capacity to establish enduring associations within their hosts, leading to the development of a mutually beneficial relationship that relies on ...
Leonie Pellissier +21 more
doaj +1 more source
Deep Potential Molecular Dynamics: a scalable model with the accuracy of quantum mechanics
, 2017 We introduce a scheme for molecular simulations, the Deep Potential Molecular Dynamics (DeePMD) method, based on a many-body potential and interatomic forces generated by a carefully crafted deep neural network trained with ab initio data.
Car, Roberto +4 more
core +1 more source
The prevalence of CRF55_01B among HIV-1 strain and its connection with traffic development in China
Emerging Microbes and Infections, 2021 CRF55_01B is a relatively “young” HIV strain. At present, we do not know much about its transmission characteristics in China. So, to describe the transmission characteristics of CRF55_01B strain among provinces and HIV infected people, and to analyze ...
Mengze Gan +7 more
doaj +1 more source
Graph Theory and Networks in Biology [PDF]
, 2006 In this paper, we present a survey of the use of graph theoretical techniques in Biology. In particular, we discuss recent work on identifying and modelling the structure of bio-molecular networks, as well as the application of centrality measures to ...
Mason, Oliver, Verwoerd, Mark
core +3 more sources
Acta Neuropathologica CommunicationsThis study aims to elucidate the clinical and molecular characteristics, treatment outcomes and prognostic factors of patients with histone H3 K27-mutant diffuse midline glioma.
Nobuhide Hayashi +44 more
doaj +1 more source