Results 61 to 70 of about 419,969 (204)

Automatic detection of anchor points for multiple sequence alignment

BMC Bioinformatics, 2010
Background Determining beforehand specific positions to align (anchor points) has proved valuable for the accuracy of automated multiple sequence alignment (MSA) software.
Pitschi Florian, Devauchelle Claudine, Corel Eduardo   +2 more
doaj   +1 more source

Kalign – an accurate and fast multiple sequence alignment algorithm

BMC Bioinformatics, 2005
Background The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families for conserved motifs, phylogeny, structural properties, and to improve ...
Sonnhammer Erik LL, Lassmann Timo
doaj   +1 more source

Comparative analysis of multiple protein-sequence alignment methods. [PDF]

, 1994
Marcella A. McClure, T K Vasi, W M Fitch
openalex   +1 more source

Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions [PDF]

, 1999
Nikola M. Stojanović
openalex   +1 more source

A genetic algorithm for multiple molecular sequence alignment [PDF]

, 1997
Ching Zhang, Andrew K. C. Wong
openalex   +1 more source

MulBlast 1.0: a multiple alignment of BLAST output to boost protein sequence similarity analysis [PDF]

, 1996
Gilles Labesse
openalex   +1 more source

Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost

BMC Bioinformatics, 2006
Background Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy and speed.
Gotoh Osamu, Yamada Shinsuke, Yamana Hayato   +2 more
doaj   +1 more source

A multi-objective fuzzy model based on enhanced artificial fish Swarm for multiple RNA sequences alignment

Egyptian Informatics Journal
Ribonucleic Acid (RNA) sequence alignment is a fundamental operation in bioinformatics, essential for analyzing the physicochemical and functional characteristics of RNA molecules.
Medhat A. Tawfeek, Ibrahim Alrashdi, Madallah Alruwaili, Gamal Farouk Elhady   +3 more
doaj   +1 more source

HMMerge: an ensemble method for multiple sequence alignment. [PDF]

Bioinform Adv, 2023
Park M, Warnow T.
europepmc   +1 more source

Tertiary structure prediction of the KIX domain of CBP using Monte Carlo simulations driven by restraints derived from multiple sequence alignments [PDF]

, 1998
Ángel R. Ortíz, Andrzej Koliński, Jeffrey Skolnick   +2 more
openalex   +1 more source