Results 11 to 20 of about 58,551 (210)

HighALPS: ultra-high-throughput marker-gene amplicon library preparation and sequencing on the Illumina NextSeq and NovaSeq Platforms [PDF]

MSystems
Nicholas Bokulich, Lena Florl
exaly   +2 more sources

Whole-genome sequencing with AVITI and NovaSeq X Plus reveals comparable performance with contextual biases [PDF]

NAR Genomics and Bioinformatics
Höjer P, Alneberg J, Lundin P, Martin T, Hauenstein J, Fällmar H, Lindell M, Natanaelsson C, Häggqvist S, Ameur A, Nordlund J, Månsson Welinder R.   +11 more
exaly   +2 more sources

Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops

Scientific Data, 2022
Measurement(s) whole genome sequencing Technology Type(s) Illumina NovaSeq. 6000 • Oxford Nanopore Sequencing Sample Characteristic - Organism Phthorimaea operculella Sample Characteristic - Location Yunnan Province, Southwest ...
Mengdi Zhang, Xinyue Cheng, Runmao Lin, Bingyan Xie, Ralf Nauen, Silvia I. Rondon, Jorge A. Zavala, Subba Reddy Palli, Suhua Li, Xingyao Xiong, Wenwu Zhou, Yulin Gao   +11 more
doaj   +1 more source

Chromosome-level haplotype-resolved genome assembly for Takifugu ocellatus using PacBio and Hi-C technologies

Scientific Data, 2023
Measurement(s) Whole Genome Sequencing • Chromosome assembly by Hi-C data • Whole Transcriptome Sequencing Technology Type(s) PacBio Sequel System • Hi-C • Illumina HiSeq. 2500 • Illumina NovaSeq.
Qingmin Zeng, Zhixiong Zhou, Qian He, Leibin Li, Fei Pu, Mengzhen Yan, Peng Xu   +6 more
doaj   +1 more source

Highly comparable metabarcoding results from MGI-Tech and Illumina sequencing platforms [PDF]

PeerJ, 2021
With the developments in DNA nanoball sequencing technologies and the emergence of new platforms, there is an increasing interest in their performance in comparison with the widely used sequencing-by-synthesis methods.
Sten Anslan, Vladimir Mikryukov, Kęstutis Armolaitis, Jelena Ankuda, Dagnija Lazdina, Kristaps Makovskis, Lars Vesterdal, Inger Kappel Schmidt, Leho Tedersoo   +8 more
doaj   +2 more sources

Accuracy benchmark of the GeneMind GenoLab M sequencing platform for WGS and WES analysis

BMC Genomics, 2022
Background GenoLab M is a recently developed next-generation sequencing (NGS) platform from GeneMind Biosciences. To establish the performance of GenoLab M, we present the first report to benchmark and compare the WGS and WES sequencing data of the ...
Chaoyang Li, Xue Fan, Xin Guo, Yongfeng Liu, Miao Wang, Xiao Chao Zhao, Ping Wu, Qin Yan, Lei Sun   +8 more
doaj   +1 more source

Genomic data of two Greek Vitis varieties

Data in Brief, 2022
The genetic material of Vitis varieties is crucial for the wine sector. In addition, genomic technologies applied in vitis germplasm characterization are important for the conservation of indigenous genetic reservoirs.
George Tsiolas, Sofia Michailidou, Antiopi Tsoureki, Anagnostis Argiriou   +3 more
doaj   +1 more source

Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies

Environmental Microbiome, 2022
Background Increasing studies have demonstrated potential disproportionate functional and ecological contributions of rare taxa in a microbial community.
Yangyang Jia, Shengguo Zhao, Wenjie Guo, Ling Peng, Fang Zhao, Lushan Wang, Guangyi Fan, Yuanfang Zhu, Dayou Xu, Guilin Liu, Ruoqing Wang, Xiaodong Fang, He Zhang, Karsten Kristiansen, Wenwei Zhang, Jianwei Chen   +15 more
doaj   +1 more source

Additional file 1 of Comparative performance of the GenoLab M and NovaSeq 6000 sequencing platforms for transcriptome and LncRNA analysis

, 2021
Additional file 1.
Liu, Yongfeng, Han, Ran, Zhou, Letian, Luo, Mingjie, Zeng, Lidong, Zhao, Xiaochao, Ma, Yukun, Zhou, Zhiliang, Sun, Lei   +8 more
openaire   +1 more source

Characterization of the complete mitochondrial genome of Coprinellus micaceus, a wild saprobic mushroom in China

Mitochondrial DNA. Part B. Resources, 2021
The Glistening Inkcap (Coprinellus micaceus) is a wild saprobic mushroom in China. In this study, we assembled and annotated its complete mitochondrial genome using raw data sequenced through Illumina NovaSeq 6000 platform (Illumina, San Diego, CA).
Shu-rong Wang, Jiang-ping Zhang, Yi-rong He, Ming-chang Chang, Jun-long Meng   +4 more
doaj   +1 more source