Results 241 to 250 of about 109,057 (295)

Time‐Efficient and Informatic‐Skill‐Light Gap‐Filling for Telomere‐to‐Telomere Genome Assembly

Advanced Science, EarlyView.
The paper introduces a novel auxiliary software toolbox GapSuite, consisting of two tools Gap‐Aid and Gap‐Graph, which guides users to fill gaps in chromosome‐level genome assembly using sequence‐extension‐based and assembly‐graph‐based strategies. The two tools enable users with limited informatics expertise to efficiently complete gap‐filling on ...
Dong Xu, Xianjia Zhao, Lianguang Shang, Shaolong Tian, Yanchun Li, Huaming Wen, Qiang Xu, Dongxi Li, Weihua Pan   +8 more
wiley   +1 more source

GAUDI: interpretable multi-omics integration with UMAP embeddings and density-based clustering. [PDF]

Nat Commun
Castellano-Escuder P, Zachman DK, Han K, Hirschey MD.   +3 more
europepmc   +1 more source

3D integrated spatial OMICS data

Spatial OMICS data sets integrated in 3D models of whole developmental ...
openaire   +1 more source

Biomechanics‐Driven 3D Architecture Inference from Histology Using CellSqueeze3D

Advanced Science, EarlyView.
CellSqueeze3D reconstructs 3D cellular architecture from standard 2D histology images using biomechanical constraints and optimization. Validated on clinical datasets, it enables accurate tissue phenotyping, predicts gene mutations, and reveals significant correlations between nuclear‐cytoplasmic ratio entropy and tumor progression.
Yan Kong, Hui Lu
wiley   +1 more source

A review on multi-omics integration for aiding study design of large scale TCGA cancer datasets. [PDF]

BMC Genomics
Han E, Kwon H, Jung I.
europepmc   +1 more source

A Map of the Lipid-Metabolite-Protein Network to Aid Multi-Omics Integration. [PDF]

Biomolecules
Anyaegbunam UA, Vagiona AC, Ten Cate V, Bauer K, Schmidlin T, Distler U, Tenzer S, Araldi E, Bindila L, Wild P, Andrade-Navarro MA.   +10 more
europepmc   +1 more source

Multi-Omics Integration Reveals Electroacupuncture Ameliorates Cognitive Impairment in Alzheimer's Disease via Gut-Brain Axis. [PDF]

Biomolecules
Zhang S, Liu X, Xu S, Li W, Song J, Tian Q, Du Y.   +6 more
europepmc   +1 more source

Decoding the cholesterol-apoptosis axis in HCC: a machine learning-based multi-omics integration and single-cell transcriptomic analysis. [PDF]

Discov Oncol
Li Y, Shi J, Zhao A, Huang J, Dai L.
europepmc   +1 more source

Composition-on-composition regression analysis for multi-omics integration of metagenomic data. [PDF]

Bioinformatics
Rios N, Shi Y, Chen J, Zhan X, Xue L, Li Q.   +5 more
europepmc   +1 more source

A multi-omics integration framework using multi-label guided learning and multi-scale fusion. [PDF]

Brief Bioinform
Li Y, Wang Y, Liang T, Li Y, Du W.
europepmc   +1 more source