Results 61 to 70 of about 55,356 (266)

Organizing the interface—Plasma membrane architecture and receptor dynamics in virus‐cell interactions

open access: yesFEBS Letters, EarlyView.
Plasma membranes contain dynamic nanoscale domains that organize lipids and receptors. Because viruses operate at similar scales, this architecture shapes early infection steps, including attachment, receptor engagement, and entry. Using influenza A virus and HIV‐1 as examples, we highlight how receptor nanoclusters, multivalent glycan interactions ...
Jan Schlegel, Christian Sieben
wiley   +1 more source

Optimizing Bayesian optimization

open access: yes, 2018
We are concerned primarily with improving the practical applicability of Bayesian optimization. We make contributions in three key areas. We develop an intuitive online stopping criterion, allowing only as many steps as necessary to achieve the desired target to be taken. By combining this with intelligent online switching between acquisition functions
openaire   +3 more sources

Epigenetic blind spots – the role of DNA methylation dynamics in stem cell‐based models of embryogenesis

open access: yesFEBS Letters, EarlyView.
Embryo‐like structures (stembryos) are an innovative tool, but they are hindered by experimental variability and limited developmental potential. DNA methylation is crucial for mammalian development, but its status in stembryo models is poorly characterized.
Sara Canil   +4 more
wiley   +1 more source

pH‐mediated activation of the lysosomal arginine sensor SLC38A9

open access: yesFEBS Letters, EarlyView.
Cells monitor nutrient levels via the lysosomal transporter SLC38A9 to activate the mechanistic target of rapamycin complex 1 (mTORC1). This study reveals that SLC38A9 function is regulated by pH. We identified histidine 544 as a critical pH sensor that undergoes conformational changes to control amino acid efflux from lysosomes; therefore, it ...
Xuelang Mu, Ampon Sae Her, Tamir Gonen
wiley   +1 more source

When is Assortment Optimization Optimal?

open access: yesProceedings of the 23rd ACM Conference on Economics and Computation, 2022
Assortment optimization concerns the problem of selling items with fixed prices to a buyer who will purchase at most one. Typically, retailers select a subset of items, corresponding to an “assortment” of brands to carry, and make each selected item available for purchase at its brand-recommended price.
openaire   +2 more sources

Optimizing Optimizers: Regret-optimal gradient descent algorithms

open access: yesCoRR, 2020
Proceedings of Thirty Fourth Conference on Learning ...
Philippe Casgrain, Anastasis Kratsios
openaire   +3 more sources

OPTIMIZATION METHODS [PDF]

open access: yesFiabilitate şi Durabilitate, 2016
Throughout the ages, man has continuously been involved with the process of optimization. In its earliest form, optimization consisted of unscientific rituals and prejudices like pouring libations and sacrificing animals to the gods, con- sulting the ...
Olimpia PECINGINA   +2 more
doaj  

Database-Inspired Optimizations for Statistical Analysis

open access: yesJournal of Statistical Software, 2018
Computing complex statistics on large amounts of data is no longer a corner case, but a daily challenge. However, current tools such as GNU R were not built to efficiently handle large data sets. We propose to vastly improve the execution of R scripts by
Hannes Mühleisen   +2 more
doaj   +1 more source

An unexpected alternative viologen electron mediator site in tungsten‐containing formate dehydrogenase

open access: yesFEBS Letters, EarlyView.
An unexpected alternative interaction site for ethyl viologen was identified in formate dehydrogenase 1 from Methylorubrum extorquens. Combined mutagenesis, kinetic analysis, and docking revealed that aromatic residues near an iron–sulfur cluster enable flavin mononucleotide‐independent electron transfer, offering a framework for engineering improved ...
Eleni G. Poloniataki, Yong Hwan Kim
wiley   +1 more source

Optimal Algorithms for Distributed Optimization

open access: yesCoRR, 2017
In this paper, we study the optimal convergence rate for distributed convex optimization problems in networks. We model the communication restrictions imposed by the network as a set of affine constraints and provide optimal complexity bounds for four different setups, namely: the function $F(\xb) \triangleq \sum_{i=1}^{m}f_i(\xb)$ is strongly convex ...
César A. Uribe   +3 more
openaire   +2 more sources

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