Results 81 to 90 of about 1,236 (207)

From Energy Deprivation Stress to Catalytic Adaptation of Reductive Dehalogenase TmrA for 1,1‐DCA Dechlorination: An Experimental and in Silico Study

Microbial Biotechnology, Volume 19, Issue 4, April 2026.
Adaptive evolution of Dehalobacter restrictus strain UNSWDHB under a ratio of 1:9 chloroform:1,1‐DCA regime increased 1,1‐DCA dechlorination. Sequencing and molecular dynamics simulation reveal high‐entropy tmrA mutations that improved 1,1‐DCA binding energy and stabilize the catalytic pocket, outlining a route to tune reductive dehalogenases for ...
Yi Ren, Evan Landers, Matthew Lee, Mike Manefield   +3 more
wiley   +1 more source

Ocean Dumping of Containerized DDT Waste Was a Sloppy Process [PDF]

, 2019
Author Posting. © American Chemical Society, 2019. This article is posted here by permission of American Chemical Society for personal use, not for redistribution. The definitive version was published in Kivenson, V., Lemkau, K. L., Pizarro, O., Yoerger,
Carmichael, Catherine A., Kaiser, Carl, Kivenson, Veronika, Lemkau, Karin L., Nelson, Robert K., Paul, Blair G., Pizarro, Oscar, Reddy, Christopher M., Valentine, David L., Yoerger, Dana R.   +9 more
core   +4 more sources

Dehalogenation of Chlorinated Ethenes to Ethene by a Novel Isolate, Candidatus Dehalogenimonas etheniformans. [PDF]

, 2022
Dehalococcoides mccartyi strains harboring vinyl chloride (VC) reductive dehalogenase (RDase) genes are keystone bacteria for VC detoxification in groundwater aquifers, and bioremediation monitoring regimens focus on D. mccartyi biomarkers. We isolated a
Chen, Gao, Cui, Yiru, Kara Murdoch, Fadime, Key, Trent, Löffler, Frank, Murdoch, Robert, Xie, Yongchao, Yan, Jun, Yang, Yi   +8 more
core   +1 more source

Human Intestinal Microbiota Composition Shapes Model Polyfluoroalkyl Substance Biotransformation

ChemBioChem, Volume 27, Issue 5, 13 March 2026.
Differences in the human gut microbiome impact the rate and pathway of biotransformation for 6:2 polyfluoroalkyl phosphate diester (diPAP), a model polyfluoroalkyl substance. Metabolic analysis is coupled to 16S RNA analysis to identify correlations between microbial taxa abundance and PAP transformation products not previously established from ...
Sierra T. Peskett, Daniel S. Grégoire, Amy A. Rand   +2 more
wiley   +1 more source

Detection of Organohalide-Respiring Enzyme Biomarkers at a Bioaugmented TCE-Contaminated Field Site

Frontiers in Microbiology, 2019
RNA-based biomarkers have been successfully detected at field sites undergoing in situ bioremediation, but the detection of expressed enzymes is a more direct way to prove activity for a particular biocatalytic process of interest since they provide ...
Gretchen L. W. Heavner, Cresten B. Mansfeldt, Michael J. Wilkins, Carrie D. Nicora, Garrett E. Debs, Elizabeth A. Edwards, Ruth E. Richardson   +6 more
doaj   +1 more source

Cobalamin‐Dependent Aryl Methyl Ether O‐Demethylases: Promising Enzymes for Biocatalytic Applications from Lignin Valorization to Organic Synthesis

ChemCatChem, Volume 17, Issue 21, November 10, 2025.
Cobalamin‐dependent aryl methyl ether O‐demethylases have high potential for biocatalytic applications, including lignin valorization and synthetic chemistry. In this review, we provide a detailed overview of such O‐demethylase systems identified to date from various microorganisms, including their mechanism, substrate scope and selectivity, and ...
Niels Krabbe Johnsen, Santipap Chaiyasarn, Zheng Guo, Jaehong Han, Bekir Engin Eser   +4 more
wiley   +1 more source

Dehalococcoides mccartyi strain CBDB1 takes up protons from the cytoplasm to reductively dehalogenate organohalides indicating a new modus of proton motive force generation

Frontiers in Microbiology, 2023
Proton translocation across the cytoplasmic membrane is a vital process for all organisms. Dehalococcoides strains are strictly anaerobic organohalide respiring bacteria that lack quinones and cytochromes but express a large membrane-bound protein ...
Nadine Hellmold, Marie Eberwein, My Hanh Thi Phan, Steffen Kümmel, Oliver Einsle, Darja Deobald, Lorenz Adrian, Lorenz Adrian   +7 more
doaj   +1 more source

Benthic diatom monitoring and assessment of freshwater environments: standard methods and future challenges [PDF]

, 2008
Fil: Soizic, Morin. National Research Institute of Science and Technology for Environment and Agriculture; FranceFil: Gómez, Nora. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. Instituto de Limnología Dr. Raúl A.
Gómez, Nora, Licursi, Magdalena, Rosebery, Juliette, Soizic, Morin, Tornés, Elisabet   +4 more
core   +2 more sources

Effect of Sea Water Inundation on CO2 and CH4 Production of Thawing Coastal Permafrost Near Utqiaġvik, Alaska

Permafrost and Periglacial Processes, Volume 36, Issue 4, Page 787-802, October/December 2025.
ABSTRACT Rising sea levels and changing marine dynamics are increasing the inundation of previously terrestrial permafrost, accelerating thaw and altering microbial carbon cycling. On the Arctic Coastal Plain of Alaska, permafrost features like drained lake basins (DLBs) and uplands (ULs), offer distinct redox conditions and formation histories that ...
Madina Lucia Dolle, Mélissa Laurent, Fabian Seemann, Jörg Schaller, Maren Jenrich, Jens Strauss, Claire Treat   +6 more
wiley   +1 more source

Assessing a Large-Scale Sequential In Situ Chloroethene Bioremediation System Using Compound-Specific Isotope Analysis (CSIA) and Geochemical Modeling

Pollutants, 2022
Compound-specific isotopic analysis (CSIA) and geochemical modeling were applied to evaluate the effectiveness of an 800 m-long sequential in situ bioremediation (ISB) system in Northern Italy.
Giulia Casiraghi, Daniele Pedretti, Giovanni Pietro Beretta, Marco Masetti, Simone Varisco   +4 more
doaj   +1 more source