Results 21 to 30 of about 2,610 (179)
Classification of orthogroups as semilattices of various rectangular groups fulfilling x^(p+1)≈x
Mathematics for Application, 2017 Completely regular semigroups whose idempotents form a subsemigroup are called orthodox completely regular semigroups, or brie y orthogroups. In this paper, we characterize orthogroups which are semilattices of various rectangular groups ful lling xp+1 x for a xed prime number p by disjunctions of identities.
Alexander Jende
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, 2020 The supplemental dataset for, "Benchmarking Orthogroup Inference Accuracy: Revisiting Orthobench". This is the updated dataset for the article published in Genome Biology and Evolution.
David Emms, Steven Kelly
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Integrative Transcriptomic and Evolutionary Analysis of Drought and Heat Stress Responses in Solanum tuberosum and Solanum lycopersicum [PDF]
PlantsAbiotic stresses such as drought and heat severely constrain the growth and productivity of Solanaceae crops, including potato (Solanum tuberosum L.) and tomato (Solanum lycopersicum L.), yet the conserved regulatory mechanisms underlying their stress ...
Eugeniya I. Bondar +3 more
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, 2022 Protein sequenecs used for gene family expansiona and ...
Kristina Gagalova
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The landscape and evolutionary dynamics of derived lncRNAs in insects [PDF]
Communications BiologyLong noncoding RNAs (lncRNAs) function as crucial regulatory elements in eukaryotes, yet have remained largely unexplored across diverse insect lineages. We present a comprehensive analysis of lncRNA atlases across 115 insect species, identifying 647,691
Dong Jing +10 more
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OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy [PDF]
Genome Biology, 2015 AbstractIdentifying homology relationships between sequences is fundamental to biological research. Here we provide a novel orthogroup inference algorithm called OrthoFinder that solves a previously undetected gene length bias in orthogroup inference, resulting in significant improvements in accuracy.
David Emms, Steven Kelly
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Type IV minor pilin ComN predicted the USS-receptor in Pasteurellaceae [PDF]
Frontiers in MicrobiologyThe Uptake Signal Sequence (USS) receptor, which facilitates the acquisition of homologous DNA by natural transformation in Haemophilus influenzae and other members of the Pasteurellaceae, remains unknown.
Stian Aleksander Helsem +5 more
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Benchmarking Orthogroup Inference Accuracy: Revisiting Orthobench [PDF]
Genome Biology and Evolution, 2020 Abstract Orthobench is the standard benchmark to assess the accuracy of orthogroup inference methods. It contains 70 expert-curated reference orthogroups (RefOGs) that span the Bilateria and cover a range of different challenges for orthogroup inference.
Emms, DM, Kelly, S
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Search for and functional annotation of multi-domain PLA2 family proteins in flatworms
Вавиловский журнал генетики и селекцииThe phospholipase A2 (PLA2) is a superfamily of hydrolases that catalyze the hydrolysis of phospholipids and play a key role in many molecular processes in the cells and the organism as a whole.
M. E. Bocharnikova +2 more
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Plants, 2023 Aquaporins (AQPs), a type of intrinsic membrane proteins that transport water and small solutes across biological membranes, play crucial roles in plant growth and development.
Zhi Zou, Yujiao Zheng, Zhengnan Xie
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