Results 121 to 130 of about 1,556 (147)

From sugarcane to polyploid crops: Graph pangenomes usher in a new era of complex-genome breeding. [PDF]

Plant Commun
Wang C, Han B.
europepmc   +1 more source

The pangenome: a statistical model, not a fixed biological property. [PDF]

Bioinform Adv
Guerra A.
europepmc   +1 more source

Pangenomics for Agricultural Breeding: Construction Strategies, Evidence Integration, and Translational Constraints. [PDF]

Biology (Basel)
Shi J, Lu Y, Sheng Z, Liu H, Li K, Chong Y, Gao Z, Deng W, Wu D.   +8 more
europepmc   +1 more source

On the use and misuse of pangenome and related terms. [PDF]

Nat Commun
Edwards D.
europepmc   +1 more source

LCPAN: efficient variation graph construction using locally consistent parsing. [PDF]

Genome Biol
Ashyralyyev A, Bingöl Z, Öz BF, Zhu K, Malikic S, Vishkin U, Sahinalp SC, Alkan C.   +7 more
europepmc   +1 more source

Diploid dual assemblies reveal the telocentric structure and extensive allelic heterogeneity of canine genomes. [PDF]

NAR Genom Bioinform
Kidd JM, Souilmi Y, Rosen BD, Khan R, Weisz D, Dudchenko O, Aiden EL, Zammit R, Ballard JWO.   +8 more
europepmc   +1 more source

Using pangenome variation graphs to improve mutation detection in a large DNA virus. [PDF]

Microb Genom
Downing T, Tennakoon C, Lasecka-Dykes L, Wright C.   +3 more
europepmc   +1 more source

Pangenome-guided sequence assembly via binary optimization. [PDF]

Brief Bioinform
Cudby J, Bonfield J, Zhou C, Durbin R, Strelchuk S.   +4 more
europepmc   +1 more source

Pangenome-based genome inference using integer programming. [PDF]

Genome Res
Chandra G, Hossen MH, Scholz S, Dilthey AT, Gibney D, Jain C.   +5 more
europepmc   +1 more source

Panalyze: automated virus pangenome variation graph construction, analysis and annotation. [PDF]

Bioinform Adv
Tennakoon C, Freville T, Downing T.
europepmc   +1 more source