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In Silico Optimization of Inhibitors of the 3-Chymotrypsin-like Protease of SARS-CoV-2. [PDF]

open access: yesLife (Basel)
Fofana I   +6 more
europepmc   +1 more source

Graph Kernels for Molecular and Reduced Graphs

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Demco, Anthony, Saunders, Craig
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Towards more accurate pharmacophore modeling: Multicomplex-based comprehensive pharmacophore map and most-frequent-feature pharmacophore model of CDK2

Journal of Molecular Graphics and Modelling, 2008
Pharmacophore modeling, including ligand- and structure-based approaches, has become an important tool in drug discovery. However, the ligand-based method often strongly depends on the training set selection, and the structure-based pharmacophore model is usually created based on apo structures or a single protein-ligand complex, which might miss some ...
Jun Zou, Sheng-yong Yang, Yu-quan Wei
exaly   +3 more sources

Pharmacophore modeling of cytochromes P450

Advanced Drug Delivery Reviews, 2002
Understanding the binding of ligands in the active site of a membrane-bound protein is difficult in the absence of a crystal structure. When these proteins are the enzymes involved in drug metabolism, it leaves little option but to use site-directed mutagenesis and in vitro studies to provide critical information relating to determinants of binding ...
Marcel J De Groot, Sean Ekins
exaly   +3 more sources

The Desferrithiocin Pharmacophore

Journal of Medicinal Chemistry, 1994
The (S)-desferrithiocin (DFT) skeleton is shown to be a useful pharmacophore on which to design orally effective iron chelators. While the study clearly indicates that formal reduction of the desazadesmethyldesferrithiocin thiazoline to a thiazolidine (6), expansion of the desmethyldesferrithiocin thiazoline to a thiazine (7), or substitution of the ...
R J, Bergeron   +5 more
openaire   +2 more sources

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