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Phylogenetic Analysis: Models and Estimation Procedures [PDF]

open access: greenEvolution; international journal of organic evolution, 1967
Acceptance of the theory of evolution as the means of explaining observed similarities and differences among organisms invites the construction of trees of descent purporting to show evolutionary relationships.
L. L. Cavalli‐Sforza, A. W. F. Edwards
openalex   +2 more sources

Phylogenetic evaluation of Escherichia coli isolated from cases of bacillus diarrhea [PDF]

open access: yesJournal of Zoonotic Diseases, 2021
Escherichia coli )E. coli) is the normal flora of the gastrointestinal tract of humans and animals, although most of the strains are known not to be pathogenic. Pathogenic strains of E. coli can cause a wide variety of diseases, including urinary tract
Sina Moshtagh   +3 more
doaj   +1 more source

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

open access: yesNucleic Acids Res., 2021
The Interactive Tree Of Life (https://itol.embl.de) is an online tool for the display, manipulation and annotation of phylogenetic and other trees. It is freely available and open to everyone.
Ivica Letunic, P. Bork
semanticscholar   +1 more source

Characterization, comparative phylogenetic, and gene transfer analyses of organelle genomes of Rhododendron × pulchrum

open access: yesFrontiers in Plant Science, 2022
Rhododendron × pulchrum, an important horticultural species, is widely distributed in Europe, Asia, and North America. To analyze the phylogenetic and organelle genome information of R.
Jianshuang Shen   +7 more
doaj   +1 more source

In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of de novo Genome Assemblies

open access: yesFrontiers in Fungal Biology, 2021
Morphological characters and nuclear ribosomal DNA (rDNA) phylogenies have so far been the basis of the current classifications of arbuscular mycorrhizal (AM) fungi.
Merce Montoliu-Nerin   +7 more
doaj   +1 more source

Genome-Wide Identification and Evolutionary Analysis of the SRO Gene Family in Tomato

open access: yesFrontiers in Genetics, 2021
SRO (SIMILAR TO RCD ONE) is a family of plant-specific small molecule proteins that play an important role in plant growth and development and environmental responses. However, SROs still lack systematic characterization in tomato.
Ning Li   +15 more
doaj   +1 more source

Hidden Genetic Variability, Can the Olive Moth Prays oleae (Lepidoptera: Yponomeutidae or Praydidae?) be a Species’ Complex?

open access: yesInsects, 2020
Prays oleae is the second most important pest in Mediterranean olive groves, causing substantial damage on olive production. We used mitochondrial [cytochrome c oxidase subunit I (COI), and NADH dehydrogenase subunit 5 (nad5)] and nuclear [ribosomal ...
Marlon Pazian   +3 more
doaj   +1 more source

mtDNA D-loop sequence analysis of Kalang, Krayan, and Thale Noi buffaloes (Bubalus bubalis) in Indonesia and Thailand reveal genetic diversity

open access: yesJournal of the Indonesian Tropical Animal Agriculture, 2021
Kalang (KBuf), Krayan (KrBuf), and Thale Noi buffaloes (TBuf) are swamp buffalo genetic resources in Indonesia and Thailand. The maternally inherited mitochondrial DNA (mtDNA), particularly D-loop region is an important material for phylogenetic ...
S. Suhardi   +2 more
doaj   +1 more source

Variation and Evolution of the Whole Chloroplast Genomes of Fragaria spp. (Rosaceae)

open access: yesFrontiers in Plant Science, 2021
Species identification is vital for protecting species diversity and selecting high-quality germplasm resources. Wild Fragaria spp. comprise rich and excellent germplasm resources; however, the variation and evolution of the whole chloroplast (cp ...
Chenxin Li   +10 more
doaj   +1 more source

Assessment of relationships between Iranian Fritillaria (Liliaceae) Species Using Chloroplast trnh-psba Sequences and Morphological Characters [PDF]

open access: yesJournal of Genetic Resources, 2015
The genus Fritillaria comprises of 165 taxa of medicinal, ornamental and horticultural importance. Evolutionary relationships in this genus is an interesting research area, attracting many researchers.
Majid Sharifi-Tehrani, Mahfouz Advay
doaj   +1 more source

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