Results 131 to 140 of about 850,464 (362)

Leveraging Automated Machine Learning for Environmental Data‐Driven Genetic Analysis and Genomic Prediction in Maize Hybrids

Advanced Science, EarlyView.
An automated machine learning framework integrating environmental and genomic data enhances genetic analysis and genomic prediction in maize. By leveraging dimension‐reduced environmental parameters, it reveals trait‐environment relationships and identifies genetic markers that govern phenotypic plasticity and genotype‐by‐environment interactions.
Kunhui He, Tingxi Yu, Shang Gao, Shoukun Chen, Liang Li, Xuecai Zhang, Changling Huang, Yunbi Xu, Jiankang Wang, Boddupalli M. Prasanna, Sarah Hearne, Xinhai Li, Huihui Li   +12 more
wiley   +1 more source

Complete mitochondrial genome and phylogenetic analysis of Schizothorax molesworthi (Cypriniformes: Cyprinidae)

Mitochondrial DNA. Part B. Resources, 2017
Schizothorax molesworthi is an endemic species and distributes in the MoTuo reaches of the Yarlung Zangbo River. It is one of the most important commercial fishes in this area. In the present study, the complete mitochondrial DNA sequence of Schizothorax
Chi Zhang, Chaowei Zhou, Tingbing Zhu, Benhe Zeng, Baohai Li   +4 more
doaj   +1 more source

Comparison of Tree-Child Phylogenetic Networks [PDF]

arXiv, 2007
Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of non-treelike evolutionary events, like recombination, hybridization, or lateral gene transfer. In this paper, we present and study a new class of phylogenetic networks, called tree-child phylogenetic networks, where every non-extant species has some ...
arxiv  

Phylogenetic Networks

, 2020
Phylogenetics is the study of the evolutionary relationships between organisms. One of the main challenges in the field is to take biological data for a group of organisms and to infer an evolutionary tree, a graph that represents these relationships.
Gross, Elizabeth, Long, Colby, Rusinko, Joseph   +2 more
openaire   +2 more sources

The Super Enhancer‐Driven Long Noncoding RNA PRKCQ‐AS1 Promotes Neuroblastoma Tumorigenesis by Interacting With MSI2 Protein and Is Targetable by Small Molecule Compounds

Advanced Science, EarlyView.
PRKCQ‐AS1 is overexpressed due to transcriptional super‐enhancers. PRKCQ‐AS1 RNA forms a complex with MSI2 protein to induce BMX mRNA stabilization and overexpression, ERK protein phosphorylation and neuroblastoma cell proliferation. Compound NSC617570 blocks PRKCQ‐AS1 binding to MSI2, leading to BMX mRNA disassociation from MSI2 protein, BMX reduction,
Sujanna Mondal, Pei Y. Liu, Janith Seneviratne, Antoine De Weck, Pooja Venkat, Chelsea Mayoh, Jing Wu, Jesper Maag, Jingwei Chen, Matthew Wong, Nenad Bartonicek, Poh Khoo, Lei Jin, Louise E. Ludlow, David S. Ziegler, Toby Trahair, Pieter Mestdagh, Belamy B. Cheung, Jinyan Li, Marcel E. Dinger, Ian Street, Xu D. Zhang, Glenn M. Marshall, Tao Liu   +23 more
wiley   +1 more source

The complete mitochondrial genome of Dabry’s sturgeon (Acipenser dabryanus)

Mitochondrial DNA. Part B. Resources, 2017
The complete mitochondrial genome of Dabry’s sturgeon (Acipenser dabryanus) was first determined in this study. The mitochondrial DNA is circular molecule (16,437 bp in length) with a typical vertebrate mitochondrial gene arrangement, including 13 ...
Juanjuan Liu, Chun Tan, Kan Xiao, Binzhong Wang, Xueqing Liu, Hejun Du   +5 more
doaj   +1 more source

Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets [PDF]

arXiv, 2011
Phylogenetic networks are a generalization of phylogenetic trees that are used in biology to represent reticulate or non-treelike evolution. Recently, several algorithms have been developed which aim to construct phylogenetic networks from biological data using {\em triplets}, i.e.
arxiv  

Gut Microbiota Colonization in Early Life Influences Susceptibility to Adulthood Hepatic Lipid Accumulation in High‐Fat‐Diet‐Fed Mice

Advanced Science, EarlyView.
This study indicates that perinatal antibiotic exposure elevates susceptibility to high‐fat‐diet‐induced hepatic lipid accumulation via disrupting early‐life gut microbiota colonization. The decreased Lactobacillus colonization inhibits primary‐to‐secondary bile acid conversion, lowering secondary bile acids, enhancing adulthood intestinal lipid ...
Yan‐Yan Zhu, Xin Dong, Hao Zhou, Ze‐Yan Li, Bo Wang, Ya‐Ping Song, Zhi‐Bing Liu, Xue Lu, Yi‐Hao Zhang, Yichao Huang, Hua Wang, De‐Xiang Xu   +11 more
wiley   +1 more source

Rapid character scoring and tabulation of large leaf‐image libraries using Adobe Bridge

Applications in Plant Sciences, Volume 10, Issue 6, November-December 2022., 2022
Abstract Premise Digital image libraries are an integral part of specimen‐based research. However, coding and extracting metadata for hundreds of specimens on a personal computer can be complex. In addition, most existing workflows require downsampling or platform switching and do not link character data directly to the images.
Gabriella Rossetto‐Harris, Elena Stiles, Peter Wilf, Michael P. Donovan, Xiaoyu Zou   +4 more
wiley   +1 more source

Next-generation sequencing yields the complete chloroplast genome of Abies Alba

Mitochondrial DNA. Part B. Resources, 2019
Abies alba is native to the mountains of Europe and often used as Christmas trees. In this study, we reported the complete chloroplast genome of A. alba. The complete chloroplast genome is 121,243 bp in length, comprising a large single copy (LSC) region
Guo-Yin Li, Wen-Jiang Wu, Yun-Xia Zhang, Jian-Hang Mao, Ya-Jie Song, Xue-Yang Han, Ming-Hui Song, Zhen-Ni Guo, Ya-bin Dong, Xiao-Meng Liu   +9 more
doaj   +1 more source