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Phylogenetics represents the computational reconstruction of evolutionary history, transforming the study of life's origins from qualitative morphological observation to precise statistical inference based on molecular data. This section provides a comprehensive framework for understanding phylogeny, detailing how genetic mutations accumulate over time
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Concordance analysis in mitogenomic phylogenetics
Molecular Phylogenetics and Evolution, 2012Here I advocate the utility of Bayesian concordance analysis as a mechanism for exploring the magnitude and source of phylogenetic signal in concatenated mitogenomic phylogenetic studies. While typically applied to the study of independently evolving gene trees, Bayesian concordance analysis can also be applied to linked, but individually analyzed ...
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Ggtree : A serialized data object for visualization of a phylogenetic tree and annotation data
iMeta, 2022Guangchuang Yu
exaly
phylosignal: an R package to measure, test, and explore the phylogenetic signal
Ecology and Evolution, 2016Agnes Bouchez +2 more
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Increased Taxon Sampling Greatly Reduces Phylogenetic Error
Systematic Biology, 2002David Hillis +2 more
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Phylogenetic Species Recognition and Species Concepts in Fungi
Fungal Genetics and Biology, 2000Takao Kasuga +2 more
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