Results 1 to 10 of about 480,005 (255)
Rearrangement operations on unrooted phylogenetic networks [PDF]
Theory and Applications of Graphs, 2019 Rearrangement operations transform a phylogenetic tree into another one and hence induce a metric on the space of phylogenetic trees. Popular operations for unrooted phylogenetic trees are NNI (nearest neighbour interchange), SPR (subtree prune and ...
Remie Janssen, Jonathan Klawitter
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On the number of vertices of each rank in phylogenetic trees and their generalizations [PDF]
Discrete Mathematics & Theoretical Computer Science, 2016 We find surprisingly simple formulas for the limiting probability that the rank of a randomly selected vertex in a randomly selected phylogenetic tree or generalized phylogenetic tree is a given integer.
Miklós Bóna
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Folding and unfolding phylogenetic trees and networks [PDF]
arXiv, 2015 Phylogenetic networks are rooted, labelled directed acyclic graphs which are commonly used to represent reticulate evolution. There is a close relationship between phylogenetic networks and multi-labelled trees (MUL-trees). Indeed, any phylogenetic network $N$ can be 'unfolded' to obtain a MUL-tree $U(N)$ and, conversely, a MUL-tree $T$ can in certain ...
C Semple +17 more
arxiv +4 more sources
Data on the solution and processing time reached when constructing a phylogenetic tree using a quantum-inspired computer [PDF]
Data in Brief, 2023 Phylogenetic trees provide insight into the evolutionary trajectories of species and molecules. However, because (2n-5)! Phylogenetic trees can be constructed from a dataset containing n sequences, but this method of phylogenetic tree construction is not
Wataru Onodera +4 more
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Embedding phylogenetic trees in networks of low treewidth [PDF]
Discrete Mathematics & Theoretical Computer Science, 2023 Given a rooted, binary phylogenetic network and a rooted, binary phylogenetic tree, can the tree be embedded into the network? This problem, called \textsc{Tree Containment}, arises when validating networks constructed by phylogenetic inference methods ...
Leo van Iersel +2 more
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Edge-related loss of tree phylogenetic diversity in the severely fragmented Brazilian Atlantic forest. [PDF]
PLoS ONE, 2010 Deforestation and forest fragmentation are known major causes of nonrandom extinction, but there is no information about their impact on the phylogenetic diversity of the remaining species assemblages.
Bráulio A Santos +3 more
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Lectura: Jurnal Pendidikan, 2023 Recent research shows that students’ ability to read and create phylogenetic trees (tree thinking) is low, meanwhile phylogenetic analysis has become one of the demands on the 2016 version of the 2013 curriculum.
Sofi Rahmania +2 more
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Ecology and Evolution, 2022 Community phylogenetic analysis is an effective approach to understanding the process of community formation. The phylogenetic tree of the species pool is reconstructed in the first step, and the phylogenetic tree obtained in the second step is used to ...
Seiya Okuno +9 more
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IEEE Access, 2023 With the development of IoT devices, there is a rapid increase in new types of IoT malware and variants, causing social problems. The malware’s phylogenetic tree has been used in many studies for malware clustering or better understanding of ...
Tianxiang He +5 more
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Towards a barnacle tree of life: integrating diverse phylogenetic efforts into a comprehensive hypothesis of thecostracan evolution [PDF]
PeerJ, 2019 Barnacles and their allies (Thecostraca) are a biologically diverse, monophyletic crustacean group, which includes both intensely studied taxa, such as the acorn and stalked barnacles, as well as cryptic taxa, for example, Facetotecta.
Christine Ewers-Saucedo +6 more
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