Results 41 to 50 of about 281,835 (164)
tidy tree: A New Layout for Phylogenetic Trees
Molecular Biology and Evolution, 2022 AbstractMany layouts exist for visualizing phylogenetic trees, allowing to display the same information (evolutionary relationships) in different ways. For large phylogenies, the choice of the layout is a key element, because the printable area is limited, and because interactive on-screen visualizers can lead to unreadable phylogenetic relationships ...
Penel, Simon, de Vienne, Damien
openaire +3 more sources
eLifeEnvironmental factors can influence ecological networks, but these effects are poorly understood in the realm of the phylogeny of host-parasitoid interactions.
Ming-Qiang Wang +22 more
doaj +1 more source
Geometry of the Space of Phylogenetic Trees
Advances in Applied Mathematics, 2001 zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Louis J. Billera +2 more
openaire +2 more sources
On Symmetries in Phylogenetic Trees
The Electronic Journal of Combinatorics, 2016 Billey et al. [arXiv:1507.04976] have recently discovered a surprisingly simple formula for the number $a_n(\sigma)$ of leaf-labelled rooted non-embedded binary trees (also known as phylogenetic trees) with $n\geq 1$ leaves, fixed (for the relabelling action) by a given permutation $\sigma\in\frak{S}_n$.
openaire +3 more sources
Visualizing phylogenetic tree landscapes [PDF]
BMC Bioinformatics, 2017 Genomic-scale sequence alignments are increasingly used to infer phylogenies in order to better understand the processes and patterns of evolution. Different partitions within these new alignments (e.g., genes, codon positions, and structural features) often favor hundreds if not thousands of competing phylogenies. Summarizing and comparing phylogenies
James C. Wilgenbusch +2 more
openaire +2 more sources
Darwintree: A Molecular Data Analysis and Application Environment for Phylogenetic Study
Data Science Journal, 2015 DarwinTree (http://www.darwintree.cn) provides an integrated bioinformatics platform that supports all phases of the analytical pathway for phylogenetic study from data collections, phylogenetic tree constructions, visualization of the tree of life, and ...
Zhen Meng +6 more
doaj +1 more source
Aegilops tauschii Coss. molecular phylogeny in comparison with proteins electrophoretic polymorphism
Acta Biologica Sibirica, 2023 In the case of Aegilops tauschii the comparison of intraspecies molecular phylogeny based on DNA sequences of nuclear gene Got2 with electrophoretic polymorphism of allozymes and hystone H1 proteins is actually a comparison of the one detailed ...
Alexander J. Dudnikov
doaj +1 more source
Fujita Medical JournalObjectives: Taxonomic assignment based on whole-genome sequencing data facilitates clear demarcation of species within a complex genus. Here, we applied a unique pan-genome phylogenetic method, open reading frame (ORF)-based binarized structure network ...
Aki Sakurai +3 more
doaj +1 more source
Building a Robust, Densely-Sampled Spider Tree of Life for Ecosystem Research
Diversity, 2020 Phylogenetic relatedness is a key diversity measure for the analysis and understanding of how species and communities evolve across time and space.
Nuria Macías-Hernández +11 more
doaj +1 more source
Phylophenetic properties of metabolic pathway topologies as revealed by global analysis
BMC Bioinformatics, 2006 Background As phenotypic features derived from heritable characters, the topologies of metabolic pathways contain both phylogenetic and phenetic components.
Sun Shiwei +9 more
doaj +1 more source