Results 31 to 40 of about 30,396 (259)

Phylogenetic context using phylogenetic outlines [PDF]

open access: yes, 2021
A bstract Microbial studies typically involve the sequencing and assembly of draft genomes for individual microbes or whole microbiomes. Given a draft genome, one first task is to determine its phylogenetic context, that is, to place it relative to the set of related reference ...
Caner Bagci   +3 more
openaire   +1 more source

Distinguishing Phylogenetic Networks [PDF]

open access: yesSIAM Journal on Applied Algebra and Geometry, 2018
Phylogenetic networks are becoming increasingly popular in phylogenetics since they have the ability to describe a wider range of evolutionary events than their tree counterparts. In this paper, we study Markov models on phylogenetic networks and their associated geometry.
Elizabeth Gross, Colby Long
openaire   +3 more sources

The phylogenetics of Leucocytozoon caulleryi infecting broiler chickens in endemic areas in Indonesia [PDF]

open access: yesVeterinary World, 2017
Aim: The objective of this research was to determine the species and strains of Leucocytozoon caulleryi and study the phylogenetics of L. caulleryi of broiler chickens in endemic areas in Indonesia.
Endang Suprihati, Wiwik Misaco Yuniarti
doaj   +1 more source

A General Substitution Matrix for Structural Phylogenetics [PDF]

open access: yesMolecular Biology and Evolution
Sriram G Garg   +2 more
exaly   +2 more sources

Climate Warming as a Possible Trigger of Keystone Mussel Population Decline in Oligotrophic Rivers at the Continental Scale

open access: yesScientific Reports, 2018
The effects of climate change on oligotrophic rivers and their communities are almost unknown, albeit these ecosystems are the primary habitat of the critically endangered freshwater pearl mussel and its host fishes, salmonids.
Ivan N. Bolotov   +19 more
doaj   +1 more source

Tangent Phylogenetic PCA

open access: yes, 2023
Phylogenetic PCA (p-PCA) is a version of PCA for observations that are leaf nodes of a phylogenetic tree. P-PCA accounts for the fact that such observations are not independent, due to shared evolutionary history. The method works on Euclidean data, but in evolutionary biology there is a need for applying it to data on manifolds, particularly shapes ...
Morten Akhøj   +2 more
openaire   +4 more sources

Combining morphological and genomic evidence to resolve species diversity and study speciation processes of the Pallenopsis patagonica (Pycnogonida) species complex

open access: yesFrontiers in Zoology, 2019
Background Pallenopsis patagonica (Hoek, 1881) is a morphologically and genetically variable sea spider species whose taxonomic classification is challenging.
Jana S. Dömel   +8 more
doaj   +1 more source

Annotated check-list of Pteromalidae (Hymenoptera: Chalcidoidea) of Morocco. Part II.

open access: yesGraellsia, 2021
En esta segunda parte, presentamos la subfamilia Pteromalinae en Marruecos, que incluye 86 especies pertenecientes a 50 géneros. Quince géneros y 37 especies se enumeran por primera vez en la fauna marroquí, de las cuales 9 han sido recientemente ...
Khadija Kissayi   +2 more
doaj   +1 more source

Uprooted Phylogenetic Networks [PDF]

open access: yesBulletin of Mathematical Biology, 2017
The need for structures capable of accommodating complex evolutionary signals such as those found in, for example, wheat has fueled research into phylogenetic networks. Such structures generalize the standard model of a phylogenetic tree by also allowing for cycles and have been introduced in rooted and unrooted form.
Gambette, Philippe   +2 more
openaire   +6 more sources

Phylogenetic Factor Analysis [PDF]

open access: yesSystematic Biology, 2017
51 pages (42 main, 9 supplemental), 9 figures (5 main, 4 supplemental), 4 tables (2 main, 2 supplemental), submitted to Systematic ...
Tolkoff, Max R.   +4 more
openaire   +5 more sources

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